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Job DescriptionQ8INJ8
Confidence100.00%DateWed Feb 13 11:35:57 GMT 2013
Rank155Aligned Residues235
% Identity21%Templatec2j2iB_
PDB info PDB header:transferaseChain: B: PDB Molecule:proto-oncogene serine/threonine-protein kinase pim-1; PDBTitle: crystal structure of the humab pim1 in complex with2 ly333531
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   798.800.........810.........820 .........830.. .......840......... 850.........860.....
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Query Sequence  AELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLKDE. . . . . . . . GAVQKFLAEASVMTTLE. . HDNLVKFIGLVFTSKH
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Template Sequence  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS
Template Known Secondary structure  TTTTTTGGG



TT


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   36...40.........50.........60.........70.........80.........90.........100.........110.....
 
   866...870.........880.........890.........900.........910.........920....... ..930.........940....
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Query Sequence  LYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLIS. EDCVAKVSDFGLAREEC
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Template Sequence  FVLILERPEPVQDLFDFITERGA. LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK
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SGGGTTTT


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   116...120.........130........ .140.........150.........160.........170.........180.........190....
 
   945....950 .........960...... ...970.........980.........990.........1000.........1010.........1020..
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Query Sequence  YNLDVG. KLPIKWTAPEALKNGR. FSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEM
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Template Sequence  DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC. GDIPFEHD. . . . . . EEIIGGQ. VFFRQRVSSECQHL
Template Known Secondary structure  SS
B



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   195....200.........210.........220.........230....... ..240..... ....250.. .......260......
 
   1023......1030.........1040.
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Query Sequence  MRQAWDLNPAKRPTFAELK
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Template Sequence  IRWCLALRPSDRPTFEEIQ
Template Known Secondary structure  T
SSGGGS

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   267..270.........280.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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