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Job DescriptionQ8INJ8
Confidence100.00%DateWed Feb 13 11:35:57 GMT 2013
Rank151Aligned Residues244
% Identity25%Templatec2i0eB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase c-beta ii; PDBTitle: structure of catalytic domain of human protein kinase c2 beta ii complexed with a bisindolylmaleimide inhibitor
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   798.800.........810.........820 .........830.... .....840........ .850.........860.........
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Query Sequence  AELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLKDEGA. . . . . VQKFLAEASVMTTL. EHDNLVKFIGLVFTSKHLYLV
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Template Sequence  TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV
Template Known Secondary structure  TTTTTTSS
T
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TT

TTB

TT
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   340.........350.........360.........370.........380.........390.........400.........410.........
 
   870.........880.........890.........900.........910.........920.........930.........940..... ..
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Query Sequence  TEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAREECY. . NL
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Template Sequence  MEYVNGGDLMYHIQQVGR. . FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT
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BTTSS..

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SGGG
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TT
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   420.........430....... ..440.........450.........460.........470.........480.........490.......
 
   948.950.........960.........970.........980.........990.........1000.........1010.........1020.......
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Query Sequence  DVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAW
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Template Sequence  TKFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIMEH. NVAYPKSMSKEAVAICKGLM
Template Known Secondary structure  B


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TTT

TT

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   498.500.........510.........520.........530..... ....540.........550..... ....560.........570.....
 
   1028.1030....... ..1040.....
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Query Sequence  DLNPAKRPTF. AELKVKLQ
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Template Sequence  TKHPGKRLGCGPEGERDIK
Template Known Secondary structure 
SSGGGSTT
STT
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   577..580.........590.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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