Return to main results Retrieve Phyre Job Id

Job DescriptionQ8INJ8
Confidence98.29%DateWed Feb 13 11:35:57 GMT 2013
Rank357Aligned Residues108
% Identity25%Templatec2dlzA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:protein vav-2; PDBTitle: solution structure of the sh2 domain of human protein vav-2
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   667..670.........680.........690.........700.........710.........720.........730.........740......
Predicted Secondary structure 
























































Query SS confidence 















































































Query Sequence  APQQGRSRCEVKLNAMPWFHGSITRDEAEHLLQPREDGLFLVRESTNFPGDYTLCVCFQSKVEHYRVKYLENKLTIDDEE
Query Conservation                                                                                  
Alig confidence 















































































Template Conservation    
         
    

 
 


  

 

     
 



 
        


       
  
        
    
Template Sequence  GSSGSSGSREIDYTAYPWFAGNMERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAK
Template Known Secondary structure 


S


S



GGGSTTS

S
TTB

S
SS


SSSTTSTTS
Template Predicted Secondary structure 












































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   747..750.........760.. .......770....
Predicted Secondary structure 






.....











Query SS confidence 















. . . . .











Query Sequence  YFENLGQLVAHYEADA. . . . . DGLCTQLIKCLP
Query Conservation                  .....            
Alig confidence 















.....











Template Conservation   
 

  

  
    
      
   
  

 
Template Sequence  KFDSLLELVEYYQCHSLKESFKQLDTTLKYPYS
Template Known Secondary structure 
BSSTTS
TTTT
TT





B

S
Template Predicted Secondary structure 
















Template SS confidence 
































   81........90.........100.........110...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions