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Job DescriptionQ8INJ8
Confidence100.00%DateWed Feb 13 11:35:57 GMT 2013
Rank90Aligned Residues241
% Identity25%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   798.800.........810.........820 .........830 .........840.........850.........860.........870.
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Query Sequence  AELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLK. . . . DEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTE
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Template Sequence  DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD
Template Known Secondary structure  TTTTTTT


SS




TTB


SS
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   11........20.........30.........40.........50.........60.........70.........80.........90
 
   872.......880.........890.........900.........910.........920....... ..930.........940........
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Query Sequence  YMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLIS. . . EDCVAKVSDFGLAREECYNLD
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Template Sequence  LVTGGELFEDIVAREF. . YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA
Template Known Secondary structure 


S
BTT
S
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TT
B



SGGGS
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TT
B

TT

B
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   91........100...... ...110.........120.........130.........140.........150.........160........
 
   949950 .........960.........970.........980.........990.........1000........ .1010.........1020...
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Query Sequence  VG. . KLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYK. . . MEAPEGCPPEIYEMM
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Template Sequence  WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI
Template Known Secondary structure 


S
S
GGG

T

B
T.SS
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TTGGGGS
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   170.........180.........190.........200........ .210.........220.........230.........240........
 
   1024.....1030.........1040.
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Query Sequence  RQAWDLNPAKRPTFAELK
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Template Sequence  DSMLTVNPKKRITADQAL
Template Known Secondary structure  S
SSGGGS

T
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   249250.........260......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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