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Job DescriptionQ8INJ8
Confidence100.00%DateWed Feb 13 11:35:57 GMT 2013
Rank83Aligned Residues240
% Identity26%Templatec1xjdA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, theta type; PDBTitle: crystal structure of pkc-theta complexed with staurosporine2 at 2a resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   798.800.........810......... 820.........830.... .....840....... ..850.........860.........
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Query Sequence  AELQLRESIGKGEFGDVMLGIL. . RNEKVAVKMLKDEGA. . . . . VQKFLAEASVMTT. LEHDNLVKFIGLVFTSKHLYLV
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Template Sequence  EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV
Template Known Secondary structure  TT
SSSTTTTTT
TT
TTB


SS
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   378.380.........390.........400.........410.........420.........430.........440.........450.......
 
   870.........880.........890.........900.........910.........920.........930.........940.........
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Query Sequence  TEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAREECYNLDV
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Template Sequence  MEYLNGGDLMYHIQSCHK. . FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK
Template Known Secondary structure 

TT
BSS..

TT
B




GGG
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TT
B



TT

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   458.460.........470..... ....480.........490.........500.........510.........520.........530.....
 
   950 .........960.........970.........980.........990.........1000.........1010.........1020.......
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Query Sequence  G. . KLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAW
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Template Sequence  TNFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI. GQSPFHGQDEEELFHSIRMD. NPFYPRWLEKEAKDLLVKLF
Template Known Secondary structure  B


S
GGG

TT

B
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   536...540.........550.........560.........570... ......580.........590... ......600.........610...
 
   1028.1030....... ..1040.
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Query Sequence  DLNPAKRPTF. AELK
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Template Sequence  VREPEKRLGVRGDIR
Template Known Secondary structure 
SSGGGSBTTBS
GG
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   615....620.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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