Job Description Q8INJ8 Confidence 98.36% Date Wed Feb 13 11:35:57 GMT 2013 Rank 346 Aligned Residues 129 % Identity 25% Template c1nw1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:choline kinase (49.2 kd); PDBTitle: crystal structure of choline kinase Resolution 2.02 Å

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		795	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.										.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.		.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																												.
Query SS confidence																													.	.	.	.	.	.	.	.	.																												.
Query Sequence		I	P	E	A	E	L	Q	L	R	E	S	I	G	K	G	E	F	G	D	V	M	L	G	I	L	R	N	.	.	.	.	.	.	.	.	.	E	K	V	A	V	K	M	L	K	D	E	G	A	V	Q	K	F	L	A	E	A	S	V	M	T	T	L	.	E	H	D	N	L	V	K	F	I	G	L	V	F	T	S	K
Query Conservation																													.	.	.	.	.	.	.	.	.																												.
Alig confidence									.																				.	.	.	.	.	.	.	.	.																												.															.	.
Template Conservation									.																																																																							.	.
Template Sequence		V	P	L	E	H	L	R	.	I	S	R	I	K	G	G	M	S	N	M	L	F	L	C	R	L	S	E	V	Y	P	P	I	R	N	E	P	N	K	V	L	L	R	V	Y	F	N	P	E	T	E	S	H	L	V	A	E	S	V	I	F	T	L	L	S	E	R	H	L	G	P	K	L	Y	G	I	F	S	G	.	.
Template Known Secondary structure				G	G	G			.								T	T										T	T	S			S	S	S			S									S																				T	T	S	S	S							T	T	.	.
Template Predicted Secondary structure									.																																																																							.	.
Template SS confidence
		71	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		865	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	L	Y	L	V	T	E	Y	M	S	K	G	S	L	V	D	Y	L	R	S	R	G	R	Q	H	I	T	K	K	D	Q	I	I	F	A	Y	D	T	A	S	G	M	E	Y	L	E	A	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.													.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.													.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	G	R	L	E	E	Y	I	P	S	R	P	L	.	.	.	.	.	.	.	.	.	.	S	C	H	E	I	S	L	A	H	M	S	T	K	I	A	K	R	V	A	K	V	H	Q	L	E	V	P	I	W	K	E	P	D	Y	L	C	E	A	L	Q	R	W	L	K	Q	L	T	G	T	V	D	A	E	H	R	F
Template Known Secondary structure		.	.													.	.	.	.	.	.	.	.	.	.		T	T	G	G	G	S															T	T				S	S			S	S																		S		T	T
Template Predicted Secondary structure		.	.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
				148	.	150	.	.	.	.	.	.	.	.	.											160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
																																					914	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	H	R	D	L	A	A	R	N	V	L	I	S	E	D	C	V	A	K	V	S	D	F	G	L	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation																																																					.	.
Template Sequence		D	L	P	E	E	C	G	V	S	S	V	N	C	L	D	L	A	R	E	L	E	F	L	R	A	H	I	S	L	S	K	S	P	V	T	F	C	H	N	D	L	Q	E	G	N	I	L	L	P	K	R	.	.	L	V	L	I	D	F	E	Y	A
Template Known Secondary structure					G	G	G	S																					T	T										S				G	G	G							.	.							T	T
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions