Phyre 2 alignment of P29349 with d1jlna

Job Description P29349
Confidence 100.00% Date Tue Jan 22 11:46:53 GMT 2013

Rank 10 Aligned Residues 277

% Identity 35% Template d1jlna_

SCOP info (Phosphotyrosine protein) phosphatases II (Phosphotyrosine protein) phosphatases II Higher-molecular-weight phosphotyrosine protein phosphatases

Resolution 1.81

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	N	A	T	R	I	T	A	A	G	I	N	A	R	V	E	Q	L	V	K	G	G	F	W	E	E	F	E	S	L	Q	Q	D	S	R	D	T	F	S	R	N	E	G	Y	K	Q	E	N	R	L	K	N	R	Y	R	N	I	L	P	Y	D	H	T	R	V	K	L	L	D	V	E	H	S	V	A	G	A	E	Y	I	N
Query Conservation
Alig confidence																				.	.														.	.	.
Template Conservation																				.	.														.	.	.
Template Sequence	A	S	R	V	L	T	R	S	Q	L	R	D	V	V	A	S	S	H	L	.	.	L	Q	S	E	F	M	E	I	P	M	N	F	V	.	.	.	D	P	K	E	I	D	I	P	R	H	G	T	K	N	R	Y	K	T	I	L	P	N	P	L	S	R	V	C	L	R	P	K	N	I	T	D	S	L	S	T	Y	I	N
Template Known Secondary structure																T	T	T		.	.								S						.	.	.		T	T	T				T	T	G	G	G	G		S	S	T	T					G	G	G	B						T	T				S	G	G	G			S
Template Predicted Secondary structure																				.	.														.	.	.
Template SS confidence
	266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.	.	.				.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

	286	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence	A	N	Y	I	R	L	P	T	D	G	.	D	L	Y	N	M	S	S	S	S	E	S	L	N	S	S	V	P	S	C	P	A	C	T	A	A	Q	T	Q	R	N	C	S	N	C	Q	L	Q	N	K	T	C	V	Q	C	A	V	K	S	A	I	L	P	Y	S	N	C	A	T	C	S	R	K	S	D	S	L	S	K	H
Query Conservation											.
Alig confidence						.	.				.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	A	N	Y	I	R	.	.	G	Y	S	G	K	E	K	A	F	I	A	T	Q	G	P	M	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						.	.		G	G	G		T	T	S									G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	341	.	.	.	.			.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

	365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	K	R	S	E	S	S	A	S	S	S	P	S	S	G	S	G	S	G	P	G	S	S	G	T	S	G	V	S	S	V	N	G	P	G	T	P	T	N	L	T	S	G	T	A	G	C	L	V	G	L	L	K	R	H	S	N	D	S	S	G	A	V	S	I	S	M	A	E	R	E	R	E	R	E	R	E	M	F	K	T
Query Conservation
Template Conservation	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence


	445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Y	I	A	T	Q	G	C	L	L	T	Q	Q	V	N	T	V	T	D	F	W	N	M	V	W	Q	E	N	T	R	V	I	V	M	T	T	K	E	Y	E	R	G	K	E	K	C	A	R	Y	W	P	D	E	G	R	S	E	Q	F	G	H	A	R	I	Q	C	V	S	E	N	S	T	S	D	Y	T	L	R	E	F	L
Query Conservation
Alig confidence	.	.	.	.	.	.	.	.	.	.	.	.	.																														.										.	.
Template Conservation	.	.	.	.	.	.	.	.	.	.	.	.	.																														.										.	.
Template Sequence	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	V	N	D	F	W	Q	M	V	W	Q	E	D	S	P	V	I	V	M	I	T	K	L	K	E	K	N	E	.	K	C	V	L	Y	W	P	E	K	.	.	R	G	I	Y	G	K	V	E	V	L	V	T	G	V	T	E	C	D	N	Y	T	I	R	N	L	V
Template Known Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G											T	T								S		S	B	S	S	S	B	.						S		S	S	.	.					T	T												S	S
Template Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.																														.										.	.
Template SS confidence
														363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.		.	.	.	.	.	.	.	.	400			.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.

	525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	V	S	W	R	D	Q	P	A	R	R	I	F	H	Y	H	F	Q	V	W	P	D	H	G	V	P	A	D	P	G	C	V	L	N	F	L	Q	D	V	N	T	R	Q	S	H	L	A	Q	A	G	E	K	P	G	P	I	C	V	H	C	S	A	G	I	G	R	T	G	T	F	I	V	I	D	M	I	L	D	Q	I	V
Query Conservation
Alig confidence							.																																						.	.	.	.
Template Conservation							.																																						.	.	.	.
Template Sequence	L	K	Q	G	S	H	.	T	Q	H	V	K	H	Y	W	Y	T	S	W	P	D	H	K	T	P	D	S	A	Q	P	L	L	Q	L	M	L	D	V	E	E	D	R	L	A	.	.	.	.	S	E	G	R	G	P	V	V	V	H	C	S	A	G	I	G	R	T	G	C	F	I	A	T	S	I	G	C	Q	Q	L	K
Template Known Secondary structure				T	T		.												S		T	T	S	S		S		S																T	.	.	.	.		T	T	S							S	S	S	S	S
Template Predicted Secondary structure							.																																						.	.	.	.
Template SS confidence
	427	.	.	430	.	.		.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.					470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.

	605	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	R	N	G	L	D	T	E	I	D	I	Q	R	T	I	Q	M	V	R	S	Q	R	S	G	L	V	Q	T	E	A	Q	Y	K	F	V	Y	Y	A	V	Q	H	Y	I	Q	T	L
Query Conservation
Alig confidence					.	.	.
Template Conservation					.	.	.
Template Sequence	E	E	G	V	.	.	.	V	D	A	L	S	I	V	C	Q	L	R	V	D	R	G	G	M	V	Q	T	S	E	Q	Y	E	F	V	H	H	A	L	C	L	F	E	S	R	L
Template Known Secondary structure			S		.	.	.														S	T	T	S	S		S																	T	S
Template Predicted Secondary structure					.	.	.
Template SS confidence
	502	.	.	.				.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.

Download:

Text version

FASTA pairwise alignment

3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions