Job Description P29349 Confidence 99.89% Date Tue Jan 22 11:46:53 GMT 2013 Rank 56 Aligned Residues 133 % Identity 23% Template c3rz2B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:protein tyrosine phosphatase type iva 1; PDBTitle: crystal of prl-1 complexed with peptide Resolution 2.80 Å

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		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	A	T	Q	G	C	L	L	T	Q	Q	V	N	T	V	T	D	F	W	N	M	V	W	Q	E	N	T	R	V	I	V	M	T	T	K	E	Y	E	R	G	K	E	K	C	A	R	Y	W	P	D	E	G	R	S	E	Q	F	G	H	A	R	I	Q	C	V	S	E	N	S	T	S	D	Y	T	L	R	E	F	L
Query Conservation
Alig confidence										.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	L	I	T	H	N	P	T	.	.	.	.	N	A	T	L	N	K	F	I	E	E	L	K	K	Y	G	V	T	T	I	V	R	V	C	E	A	T	Y	D	T	T	L	V	E	K	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										.	.	.	.	T	T	T										T	T	T							S	S				S							T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	W	R	D	Q	P	A	R	R	I	F	H	Y	H	F	Q	V	W	P	D	H	G	V	P	A	D	P	G	C	V	L	N	F	L	Q	D	V	N	T	R	Q	S	H	L	A	Q	A	G	E	K	P	G	P	I	C	V	H	C	S	A	G	I	G	R	T	G	T	F	I	V	I	D	M	I	L	D	Q	I	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.															.																			.	.	.	.	.																											.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.															.																			.	.	.	.	.																											.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	I	H	V	L	D	W	P	F	D	D	G	A	P	P	.	S	N	Q	I	V	D	D	W	L	S	L	V	K	I	K	F	R	E	.	.	.	.	.	E	P	G	C	C	I	A	V	H	C	V	A	G	L	G	R	A	P	V	L	V	A	L	A	L	I	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.		B			B					S	S	S			.																			.	.	.	.	.	S	T	T								S	S	S	S	T												.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.															.																			.	.	.	.	.																											.	.	.	.	.
Template SS confidence
													63	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.						.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		605	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	G	L	D	T	E	I	D	I	Q	R	T	I	Q	M	V	R	S	Q	R	S	G	L	V	Q	T	E	A	Q	Y	K	F	V	Y	Y
Query Conservation
Alig confidence		.	.	.	.																									.
Template Conservation		.	.	.	.																									.
Template Sequence		.	.	.	.	E	G	G	M	K	Y	E	D	A	V	Q	F	I	R	Q	K	R	R	G	A	F	N	S	K	.	Q	L	L	Y	L	E	K
Template Known Secondary structure		.	.	.	.		T	S	S											T	T	T	S	S						.							T
Template Predicted Secondary structure		.	.	.	.																									.
Template SS confidence
						121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions