Job Description P29349 Confidence 100.00% Date Tue Jan 22 11:46:53 GMT 2013 Rank 46 Aligned Residues 197 % Identity 29% Template c2oq1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:tyrosine-protein kinase zap-70; PDBTitle: tandem sh2 domains of zap-70 with 19-mer zeta1 peptide Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.																																					.
Query SS confidence																											.																																					.
Query Sequence		M	S	S	R	R	W	F	H	P	T	I	S	G	I	E	A	E	K	L	L	Q	E	Q	G	F	.	D	G	S	F	L	A	R	L	S	S	S	N	P	G	A	F	T	L	S	V	R	R	G	N	E	V	T	H	I	K	I	Q	N	N	G	D	.	F	F	D	L	Y	G	G	E	K	F	A	T	L	P	E	L	V
Query Conservation																											.																																					.
Alig confidence																											.																																					.
Template Conservation
Template Sequence		A	A	H	L	P	F	F	Y	G	S	I	S	R	A	E	A	E	E	H	L	K	L	A	G	X	A	D	G	L	F	L	L	R	Q	C	L	R	S	L	G	G	Y	V	L	S	L	V	H	D	V	R	F	H	H	F	P	I	E	R	Q	L	N	G	T	Y	A	I	A	G	G	K	A	H	C	G	P	A	E	L	C
Template Known Secondary structure		T	T	T		T	T	B		B	S													T	T			T	T								S	S	S	T	T									T	T											T	T	S					T	T	S			B	S	S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																																																				.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Y	Y	M	E	N	G	E	L	K	E	K	N	G	Q	A	I	E	L	K	Q	P	L	I	C	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.
Template Sequence		E	F	Y	S	R	D	P	D	G	L	P	C	N	.	.	.	.	.	L	R	K	P	C	N	R	P	S	G	L	E	P	Q	P	G	V	F	D	C	L	R	D	A	X	V	R	D	Y	V	R	Q	T	W	K	L	E	G	E	A	L	E	Q	A	I	I	S	Q	A	P	Q	V	E	K	L	I	A	T	T	A	H	E
Template Known Secondary structure									T	T	S	S	S		.	.	.	.	.			S	B					T	T				B																																														G	G	G
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																									.																																			.
Query SS confidence																									.																																			.
Query Sequence		T	E	R	W	F	H	G	N	L	S	G	K	E	A	E	K	L	I	L	E	R	G	K	.	N	G	S	F	L	V	R	E	S	Q	S	K	P	G	D	F	V	L	S	V	R	T	D	D	K	V	T	H	V	M	I	R	W	Q	.	D	K	K	Y	D	V	G	G	G	E	S	F	G	T	L	S	E	L	I	D	H
Query Conservation																									.																																			.
Alig confidence																									.										.																									.
Template Conservation																																			.
Template Sequence		R	X	P	W	Y	H	S	S	L	T	R	E	E	A	E	R	K	L	Y	S	G	A	Q	T	D	G	K	F	L	L	R	P	R	.	K	E	Q	G	T	Y	A	L	S	L	I	Y	G	K	T	V	Y	H	Y	L	I	S	Q	D	K	A	G	K	Y	C	I	P	E	G	T	K	F	D	T	L	W	Q	L	V	E	Y
Template Known Secondary structure		G	S	T	T	B		S	S												S	S				T	T								.	S	S	T	T									T	T											T	T	S				S	T	T	S			B	S	S
Template Predicted Secondary structure																																			.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	R	N	P	M	V	E	T	C	G	T	V	V	H	L	R	Q	P	F	N	A
Query Conservation
Alig confidence							.	.	.	.
Template Conservation							.	.	.	.
Template Sequence		L	K	L	K	A	.	.	.	.	D	G	L	I	Y	C	L	K	E	A	C	P	N
Template Known Secondary structure							.	.	.	.	T	T	S	S	S				S	B
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		241	.	.	.	.					.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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