Return to main results Retrieve Phyre Job Id

Job DescriptionA1ZAY1
Confidence99.80%DateWed Feb 13 11:18:13 GMT 2013
Rank9Aligned Residues83
% Identity28%Templatec2yt6A_
PDB info PDB header:cell cycleChain: A: PDB Molecule:adult male urinary bladder cdna, riken full- PDBTitle: solution structure of the sh3_1 domain of yamaguchi sarcoma2 viral (v-yes) oncogene homolog 1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   263......270.........280.........290.........300.........310.........320.........330.........340..
Predicted Secondary structure 


















































Query SS confidence 















































































Query Sequence  QGQQGQQSQQQQQPQLGLGTDDLRYHGTELVMLYDYKAQAPDDLYLSVRRGDWIYADLTNQTVDGWLWAYAPKTRKYGFI
Query Conservation                                 




 
   

 



  



 
 
    



        
  
 
Alig confidence 










































..









..






















Template Conservation 



    
 
     
              

 

 
    
..

   

 
 ..

      

       
  
 
Template Sequence  GSSGSSGASSSFSVVSSSYPTGLTGGVTIFVALYDYEARTTED. . LSFKKGERFQ. . IINNTEGDWWEARSIATGKSGYI
Template Known Secondary structure 



















SS

SS

SS



SSTTS..



TT
..
S
TT
SSS

Template Predicted Secondary structure 



































..



..









Template SS confidence 















































































   1........10.........20.........30.........40... ......50... ......60.........70......
 
   343......
Predicted Secondary structure 





Query SS confidence 






Query Sequence  PKAYARP
Query Conservation 
 


 
Alig confidence 






Template Conservation 

 

  
Template Sequence  PSNYVVP
Template Known Secondary structure 
TTT
Template Predicted Secondary structure 
Template SS confidence 






   77..80...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions