Return to main results Retrieve Phyre Job Id

Job DescriptionA1ZAY1
Confidence99.50%DateWed Feb 13 11:18:13 GMT 2013
Rank206Aligned Residues60
% Identity18%Templatec1t0jA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:voltage-gated calcium channel subunit beta2a; PDBTitle: crystal structure of a complex between voltage-gated calcium channel2 beta2a subunit and a peptide of the alpha1c subunit
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   285....290.........300..... ....310.........320.........330... ......340......
Predicted Secondary structure 














.....









.






Query SS confidence 




















. . . . .



























.












Query Sequence  LRYHGTELVMLYDYKAQAPDD. . . . . LYLSVRRGDWIYADLTNQTVDGWLWAYA. PKTRKYGFIPKAY
Query Conservation           




 
   

..... 



  



 
 
    



     .   
  
 

 

Alig confidence 




















.....











..













.












Template Conservation    
    






    
 
 
     


  



 ..
    
  

 

        
 


  
Template Sequence  TKPVAFAVRTNVRYSAAQEDDVPVPGMAISFEAKDFLH. . VKEKFNNDWWIGRLVKEGCEIGFIPSPV
Template Known Secondary structure  TS



SS
B


GGG

SSTT
B

B
TT
..TTSSTT



Template Predicted Secondary structure 




























..










Template SS confidence 



































































   57..60.........70.........80.........90.... .....100.........110.........120..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions