Return to main results Retrieve Phyre Job Id

Job DescriptionA1ZAY1
Confidence99.70%DateWed Feb 13 11:18:13 GMT 2013
Rank79Aligned Residues57
% Identity28%Templatec1s1nA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:nephrocystin 1; PDBTitle: sh3 domain of human nephrocystin
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   289290.........300.........310.........320.........330.........340.........350
Predicted Secondary structure 































Query SS confidence 





























































Query Sequence  GTELVMLYDYKAQAPDDLYLSVRRGDWIYADLTNQTVDGWLWAYAPKTRKYGFIPKAYARPP
Query Conservation       




 
   

 



  



 
 
    



        
  
 

 


 
 
Alig confidence 
















..









..














.














Template Conservation 
    

 

      
..

   

 
 ..

      

     .    
  
  

   
Template Sequence  GEEYIAVGDFTAQQVGD. . LTFKKGEILL. . VIEKKPDGWWIAKDA. KGNEGLVPRTYLEPY
Template Known Secondary structure 

S
B

SSSS
..

B
SS..
S

SSS
S.SS
STT
Template Predicted Secondary structure 









..



..




.






Template SS confidence 





























































   154.....160.........170 .........180 .........190..... ....200.........210
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions