Job Description Q8INU2 Confidence 99.61% Date Tue Jan 22 11:33:37 GMT 2013 Rank 22 Aligned Residues 69 % Identity 45% Template c3jv3A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:intersectin-1; PDBTitle: structure of sh3e-dh unit of murine intersectin-1l Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

943

.

.

.

.

.

.

950

.

.

.

.

.

.

.

.

.

960

.

.

.

.

.

.

.

.

.

970

.

.

.

.

.

.

.

.

.

980

.

.

.

.

.

.

.

.

.

990

.

.

.

.

.

.

.

.

.

1000

.

.

.

.

.

.

.

.

.

1010

.

Predicted Secondary structure

Query SS confidence

Query Sequence

I

L

D

K

V

I

A

L

Y

P

Y

K

A

Q

N

D

D

E

L

S

F

D

K

D

D

I

I

S

V

L

G

R

D

E

P

E

W

W

R

G

E

L

N

G

L

S

G

L

F

P

S

N

Y

V

G

P

F

V

T

S

G

K

P

A

K

A

N

G

T

Query Conservation

Alig confidence

Template Conservation

Template Sequence

G

S

C

Q

V

I

G

M

Y

D

Y

T

A

Q

N

D

D

E

L

A

F

S

K

G

Q

I

I

N

V

L

N

K

E

D

P

D

W

W

K

G

E

V

S

G

Q

V

G

L

F

P

S

N

Y

V

K

L

T

T

D

M

D

P

S

Q

Q

W

C

S

D

Template Known Secondary structure

S

S

B

S

S

T

T

B

B

T

T

S

T

T

T

T

G

G

G

G

G

G

S

T

T

Template Predicted Secondary structure

Template SS confidence

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions