Job Description Q8INU2 Confidence 97.06% Date Tue Jan 22 11:33:37 GMT 2013 Rank 369 Aligned Residues 130 % Identity 18% Template c3a8rB_ PDB info PDB header:calcium binding protein Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: the structure of the n-terminal regulatory domain of a plant nadph2 oxidase Resolution 2.40 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		R	L	K	Y	Q	E	Q	F	R	A	L	Q	P	Q	A	G	F	V	T	G	A	Q	A	K	G	F	F	L	Q	S	Q	L	P	.	.	P	L	I	L	G	Q	I	W	A	L	A	D	T	D	S	D	G	K	M	N	I	N	E	F	S	I	A	C	K	L	I	N	L	K	L	R	G	M	D	V	P	K	V	L	P
Query Conservation																																			.	.
Alig confidence														.																					.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	A	A	V	E	K	R	F	N	Q	L	Q	.	V	D	G	V	L	L	R	S	R	F	G	K	C	I	G	M	D	G	S	D	E	F	A	V	Q	M	F	D	S	L	A	R	K	R	G	I	V	K	Q	V	L	T	K	D	E	L	K	D	F	Y	E	Q	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														.	B	T	T	B			G	G	G						T			S																	T			S	S																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	L	L	S	S	L	T	G	D	V	P	S	M	T	P	R	G	S	T	S	S	L	S	P	L	D	P	L	K	G	I	V	P	A	V	A	P	V	V	P	V	V	A	P	P	V	A	V	A	T	V	I	S	P	P	G	V	S	V	P	S	G	P	T	P	P	T	S	N	P	P	S	R	H	T	S	I	S	E
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.											.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	P	S	I	E	S	V	N	Q	G	E	W	A	V	Q	A	A	Q	K	R	K	Y	T	Q	V	F	N	A	N	D	R	T	R	S	G	Y	L	T	G	S	Q	A	R	G	V	L	V	Q	S	K	L	P	Q	V	T	.	.	.	.	.	.	.	.	.	.	L	A	Q	I	W	T	L	S	D	I	D	G	D	G
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	G	F	D	N	R	L	R	T	F	F	D	M	V	D	K	N	A	D	G	R	L	T	A	E	E	V	K	E	I	I	A	L	S	A	S	A	N	K	L	S	K	I	K	E	R	A	D	E	Y	T	A	L	I	M	E	E	L	D	P	T	N	L	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T		S	S																																								T	T			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		243	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	N	C	D	E	F	I	L	A	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	I	E	M	E	D	L	E	A	L	L
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions