Job Description Q8INU2 Confidence 95.66% Date Tue Jan 22 11:33:37 GMT 2013 Rank 463 Aligned Residues 134 % Identity 15% Template c2oy6B_ PDB info PDB header:contractile protein Chain: B: PDB Molecule:myosin regulatory light chain lc-2; PDBTitle: crystal structure of squid mg.adp myosin s1 Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		V	T	P	R	E	R	L	K	Y	Q	E	Q	F	R	A	L	Q	P	Q	A	.	G	F	V	T	G	A	Q	A	K	G	F	F	L	Q	S	Q	L	P	P	L	I	L	G	Q	I	W	A	L	A	D	T	D	S	D	G	K	M	N	I	N	E	F	S	I	A	C	K	L	I	N	L	K	L	R	G	M	D	V	P
Query Conservation																						.
Alig confidence																						.																					.	.																												.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.																												.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	Q	R	Q	M	Q	E	L	K	E	A	F	T	M	I	D	Q	D	R	D	G	F	I	G	M	E	D	L	K	D	M	F	S	S	L	G	R	V	P	P	.	.	D	D	E	L	N	A	M	L	K	E	C	P	G	Q	L	N	F	T	A	F	L	T	L	F	G	E	K	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																			S	S		T	T	T												T	T	T					.	.	T	T	T					G	G	G	S	S	S													T	T	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	L	P	P	S	L	L	S	S	L	T	G	D	V	P	S	M	T	P	R	G	S	T	S	S	L	S	P	L	D	P	L	K	G	I	V	P	A	V	A	P	V	V	P	V	V	A	P	P	V	A	V	A	T	V	I	S	P	P	G	V	S	V	P	S	G	P	T	P	P	T	S	N	P	P	S	R	H	T
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		S	I	S	E	R	A	P	S	I	E	S	V	N	Q	G	E	W	A	V	Q	A	A	Q	K	R	K	Y	T	Q	V	F	N	A	N	D	R	T	R	S	G	Y	L	T	G	S	Q	A	R	G	V	L	V	Q	S	K	.	.	L	P	Q	V	T	L	A	Q	I	W	T	L	S	D	I	D	G	D	G	R	L	N	C
Query Conservation																																																									.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	G	T	D	P	E	D	A	L	R	N	A	F	S	M	F	D	E	D	G	Q	G	F	I	P	E	D	Y	L	K	D	L	L	E	N	M	G	D	N	F	S	K	E	E	I	K	N	V	W	K	D	A	P	L	K	.	N	K	Q	F	N	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T														T	T		S	S	S	S	B												T	S	S	S													S					.	T	T	S		B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.
Template SS confidence
																			78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.
		247	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	F	I	L	A	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	K	M	V	D	I	K
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions