Return to main results Retrieve Phyre Job Id

Job DescriptionQ8INU2
Confidence99.47%DateTue Jan 22 11:33:37 GMT 2013
Rank88Aligned Residues54
% Identity30%Templatec1w70A_
PDB info PDB header:sh3 domainChain: A: PDB Molecule:neutrophil cytosol factor 4; PDBTitle: sh3 domain of p40phox complexed with c-terminal polyproline2 region of p47phox
Resolution1.46 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   946...950.........960.........970.........980.........990.........
Predicted Secondary structure 


























Query SS confidence 





















































Query Sequence  KVIALYPYKAQNDDELSFDKDDIISVLGRDEPEWWRGELNGLSGLFPSNYVGPF
Query Conservation     


 
 
   




  

 
 
       

 
   
  
  
 


   
Alig confidence 





















































Template Conservation     

  
      



  

 
 

      
  
   
  
 

  

  
Template Sequence  RAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKIL
Template Known Secondary structure  SS
B

SSTTB

B
TT

SSSTTGGG
Template Predicted Secondary structure 




















Template SS confidence 





















































   174.....180.........190.........200.........210.........220.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions