 |
| Job Description | Q8IR23 | | Confidence | 98.98% | Date | Tue Jan 22 11:23:02 GMT 2013 |
| Rank | 228 | Aligned Residues | 99 |
| % Identity | 19% | Template | d2cm5a1 |
| SCOP info | C2 domain-like
| C2 domain (Calcium/lipid-binding domain, CaLB)
| Synaptotagmin-like (S variant)
|
| Resolution | 1.28 |
|
 |
|   |   |
504 | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | |
|
|
. | 520 | . | . | . | . | . | . | . | . | |
. | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | |
. | . | . | . | . | . | 550 | . | . | |
|
. | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
| . |
|
|
|
|
|  |  |
|
| . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | N | L | H | V | L | E | A | H | R | L | P | F | K | L | . |
. |
. |
V | P | H | P | Y | C | S | I | S | L | . |
N | Q | V | K | V | G | K | T | R | V | K | I | A | P | E | . |
P | V | W | E | E | E | F | V | L | . |
. |
D | D | V | P | P | D | V | V | S | L | T | I | T | L | I | S | R | G | K | R | G | K | D | S |
| Query Conservation |   |
|   |
|   |
|   |
|
|
|   |
|
|   |
|   | . | . | . |   |   |   |   |
|
|
|
|   |
| . |
|   |   |
|   |
|
|
|
|
|
|   |   |   |
| . |
|
|
|   |
|
|
|   |
| . | . |   |
|
|
|   |   |   |   |   |
|   |
|   |
|   |   |   |   |
|   |   |
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
L | I | V | G | I | I | R | C | V | H | L | A | A | X | D | A | N | G | Y | S | D | P | F | V | K | L | W | L | K | P | D | K | A | K | H | K | T | Q | I | K | K | K | T | L | N | P | E | F | N | E | E | F | F | Y | D | I | K | H | S | D | L | A | K | K | S | L | D | I | S | V | W | D | Y | D | I | G | K | S | N | D |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | S |
|
|
|
| S | T | T | S |
|
|
|  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |
|
|
|
|
| S |
| S | S |
|  |  |  |  |  |  |  |  |  |
|
| G | G | G | G | G | G |
|  |  |  |  |  |  |  |  |
|
| S | S | S |
|
|  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
557 | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . |
|   |
|   |   |
577 | . | . | 580 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
E | V | A | E | L | T | I | D | L | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | L | K | N | G | Q | E | T | E | G | W | Y | Q | L | T | G |
| Query Conservation |   |
  |
|
|   |
|   |
|   |
|   | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |
|   |
|   |
|
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |
| Template Sequence |   |
Y | I | G | G | C | Q | L | G | I | S | A | K | G | E | R | L | K | H | W | Y | E | C | L | K | N | K | D | K | K | I | E | R | W | H | Q | L | Q | N |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |
| B |
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|