Job Description Q8IR23 Confidence 100.00% Date Tue Jan 22 11:23:02 GMT 2013 Rank 4 Aligned Residues 255 % Identity 27% Template d1nf1a_ SCOP info GTPase activation domain, GAP GTPase activation domain, GAP p120GAP domain-like Resolution 2.50

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		630	.	.	.	.	.	.	.					.	.	640	.	.	.	.	.	.	.	.	.	650	.	.		.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.
Predicted Secondary structure										.	.	.	.																.
Query SS confidence										.	.	.	.																.
Query Sequence		S	P	L	Q	Q	L	L	L	.	.	.	.	E	S	E	L	Y	A	V	K	A	L	A	E	L	C	H	.	N	D	R	V	P	L	A	T	A	L	L	R	V	F	R	Q	E	K	R	E	T	E	L	I	R	M	L	C	Q	A	E	V	T	R	E	N	E	T	T	T	L	F	R	G	A	S	L	A	T	T	L	M
Query Conservation										.	.	.	.																.
Alig confidence										.	.	.	.																.
Template Conservation
Template Sequence		E	R	L	V	E	L	V	T	M	M	G	D	Q	G	E	L	P	I	A	M	A	L	A	N	V	V	P	C	S	Q	W	D	E	L	A	R	V	L	V	T	L	F	D	S	R	H	L	L	Y	Q	L	L	W	N	M	F	S	K	E	V	E	L	A	D	S	M	Q	T	L	F	R	G	N	S	L	A	S	K	I	M
Template Known Secondary structure			T										T		T	T	S	T	T						T	T	S		G	G	G														T	T	T													T	T	S	S	S	S	S	T	T	S	T	T		S			T	T
Template Predicted Secondary structure
Template SS confidence
		1206	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.
		705	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	Y	M	R	T	E	C	S	G	F	L	Q	S	A	V	S	E	T	V	Q	R	I	L	E	S	K	Q	S	A	E	L	N	P	T	K	M	D	V	N	D	D	A	C	T	N	A	E	F	L	L	Q	I	L	D	L	V	T	Q	S	I	F	T	S	P	D	A	C	P	R	N	V	R	F	I	C	S	C	L	Q
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	F	C	F	K	V	Y	G	A	T	Y	L	Q	K	L	L	D	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	E	E	N	Q	R	N	L	L	Q	M	T	E	K	F	F	H	A	I	I	S	S	S	S	E	F	P	P	Q	L	R	S	V	C	H	C	L	Y
Template Known Secondary structure										T	T					S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T	T	T	S	T	T	T	T											T	T	T	T			T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1286	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.																							.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.
		785	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	V	M	A	K	W	P	T	E	R	L	V	R	T	R	V	V	S	G	F	I	F	L	R	L	L	C	P	A	L	L	N	P	R	Q	F	G	L	V	S	E	T	P	P	M	A	A	T	R	S	L	V	M	V	A	K	C	L	Q	N	L	A	N	L	I	E	F	G	G	K	E	Q	Y	M	E	V	V	N	P
Query Conservation
Alig confidence												.	.	.																												.	.	.	.	.	.	.	.																						.
Template Conservation												.	.	.																												.	.	.	.	.	.	.	.																						.
Template Sequence		Q	V	V	S	Q	R	F	P	Q	N	.	.	.	S	I	G	A	V	G	S	A	M	F	L	R	F	I	N	P	A	I	V	S	P	Y	E	A	P	I	I	.	.	.	.	.	.	.	.	E	R	G	L	K	L	M	S	K	I	L	Q	S	I	A	N	H	V	L	F	T	.	K	E	E	H	M	R	P	F	N	D
Template Known Secondary structure					T	T	T			S	S	.	.	.													T								T	T						.	.	.	.	.	.	.	.						T											T					.	S	S	T	T	S	G	G	G
Template Predicted Secondary structure												.	.	.																												.	.	.	.	.	.	.	.																						.
Template SS confidence
		1370	.	.	.	.	.	.	.	.	.				1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.									.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.		.	.	1430	.	.	.	.	.	.	.
		865	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	L	K	N	K	E	R	M	I	V	F	L	D	Q	L	S	S	V	N	D	P	N	Q	P	L	G	M	F	V	E	Q	S	T	N	L	N	S	Q	D	T	G	R	E	L	A	T	L	H	H	I	C	V	S	H	S	Q	E	L	H	E	L	S	N	I	L	S	I	K	K	L	V	T	V	T	D	M	L	T	K
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	K	S	N	F	D	A	A	R	R	F	F	L	D	I	A	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	R	L	L	W	N	N	Q	E	K	I	G	Q	Y	L	S	S	R	P	F	D	K	M	A	T	L	L	A	Y	L	G	P
Template Known Secondary structure						T											T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.							T	T					S	T	T													T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1446	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.																													.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.
		945	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1528	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions