Job Description Q8IR23 Confidence 99.75% Date Tue Jan 22 11:23:02 GMT 2013 Rank 99 Aligned Residues 156 % Identity 18% Template c3qwyA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:cell death abnormality protein 2; PDBTitle: ced-2 Resolution 2.52 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.									.	140	.	.
Predicted Secondary structure																															.																									.	.	.												.	.	.	.	.	.	.	.
Query SS confidence																															.																									.	.	.												.	.	.	.	.	.	.	.
Query Sequence		A	I	I	A	P	P	E	S	E	W	Y	H	G	R	L	D	R	Y	S	A	E	S	R	L	R	G	S	S	K	.	L	G	S	Y	L	V	R	E	S	D	R	K	P	G	S	Y	V	L	S	Y	Y	G	R	T	.	.	.	G	I	N	H	F	R	I	T	A	V	C	.	.	.	.	.	.	.	.	G	D	F	Y
Query Conservation																															.																									.	.	.												.	.	.	.	.	.	.	.
Alig confidence																															.												.													.	.	.												.	.	.	.	.	.	.	.
Template Conservation																																											.
Template Sequence		G	F	D	P	F	E	W	R	S	F	Y	F	P	G	M	S	R	E	E	A	H	K	L	L	G	E	P	Q	V	S	I	G	T	F	L	M	R	D	S	S	R	.	P	G	E	Y	S	L	T	V	R	E	A	D	E	G	N	A	V	C	H	Y	L	I	E	R	G	E	P	K	E	D	G	T	A	A	A	G	V	K
Template Known Secondary structure					G	G	G	G	G	G	G			T	T												S	T	T			T	T								S	S	.	T	T										S	S	S	S														T	T	T	T
Template Predicted Secondary structure																																											.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	G	R	Q	F	I	S	L	S	D	L	V	G	Y	Y	T	S	C	S	D	L	L	K	R	E	R	L	A	I	P	V	A	P	P	E	P	V	N	D	K	K	R	V	V	A	I	L	P	Y	T	K	M	P	E	T	D	E	L	S	F	Q	K	G	D	I	F	F	V	H	N	D	M	G	D	G	W	L	W	V
Query Conservation
Alig confidence																						.	.	.	.	.	.																												.
Template Conservation																						.	.	.	.	.	.																												.
Template Sequence		I	A	N	Q	S	F	P	D	I	P	A	L	L	N	H	F	K	M	R	V	.	.	.	.	.	.	L	T	E	A	S	L	L	A	A	Y	K	K	P	I	I	E	V	V	V	G	T	F	K	F	T	G	E	.	R	E	T	D	L	P	F	E	Q	G	E	R	L	E	I	L	S	K	T	N	Q	D	W	W	E	A
Template Known Secondary structure			T	T				S	S											S		.	.	.	.	.	.	S	S	S																		S	S		B			S	.	S	T	T	B			B		T	T										S	S	S
Template Predicted Secondary structure																						.	.	.	.	.	.																												.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.							.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	H	R	T	G	E	Q	G	M	I	F	R	E	L	V	D
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		R	N	.	A	L	G	T	T	G	L	V	P	A	N	Y	V	Q
Template Known Secondary structure				.	T	T	S							G	G	G
Template Predicted Secondary structure				.
Template SS confidence
		157	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions