Return to main results Retrieve Phyre Job Id

Job DescriptionQ8IR23
Confidence97.26%DateTue Jan 22 11:23:02 GMT 2013
Rank258Aligned Residues89
% Identity12%Templatec3qwmA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:iq motif and sec7 domain-containing protein 1; PDBTitle: crystal structure of gep100, the plextrin homology domain of iq motif2 and sec7 domain-containing protein 1 isoform a
Resolution2.39 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   390.........400.........410.........420.. .......430.........440.........450.... .....460.....
Predicted Secondary structure 




















...
















.






Query SS confidence 
































. . .































.










Query Sequence  KSDKTTKWKQLYFALINDGSETQLCFYDNPKKT. . . KPKGLIDLSCAYLYQCHDSLWERPYCFQIVER. ALPCLATVTYL
Query Conservation       
 

    

        
        
... 


 



 
 
  

 

  
  



   .         
 
Alig confidence 

















....










...


















..










.










Template Conservation   
  

    
  




.... 

  
       
  
    
    
      ..     
 
              
Template Sequence  NKPQKLGLHQREIFLFND. . . . LLVVTKIFQNSVTYSFRQSFSLYGMQVLLFENQ. . YYPNGIRLTSSVPGADIKVLINF
Template Known Secondary structure  TS


TTTTSS....












TT

S..S
TT

TTS

Template Predicted Secondary structure 











....













..










Template SS confidence 















































































   752.......760......... 770.........780.........790.........800.. .......810.........820.....
 
   466...470.........480....
Predicted Secondary structure 


Query SS confidence 


















Query Sequence  CAPSQESYVEWINSLKAQC
Query Conservation     
 

   

  

   
Alig confidence 


















Template Conservation   
 
 


  

  
  

Template Sequence  NAPNPQDRKKFTDDLRESI
Template Known Secondary structure 
SS
Template Predicted Secondary structure 

Template SS confidence 


















   829830.........840.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions