Return to main results Retrieve Phyre Job Id

Job DescriptionQ8IR23
Confidence99.15%DateTue Jan 22 11:23:02 GMT 2013
Rank212Aligned Residues100
% Identity17%Templatec3nsuA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:phosphatidylinositol 4,5-bisphosphate-binding protein slm1; PDBTitle: a systematic screen for protein-lipid interactions in saccharomyces2 cerevisiae
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   378.380.........390.........400.........410.........420.. .......430.........440.... ....
Predicted Secondary structure 


























...












......


Query SS confidence 












































. . .





















. . . . . .



Query Sequence  IKGIKHHGHLNKKSDKTTKWKQLYFALINDGSETQLCFYDNPKKT. . . KPKGLIDLSCAYLYQCHDSLWE. . . . . . RPYC
Query Conservation 
    
 
 
       
 

    

        
        
... 


 



 
 
  

 

  ......
  
Alig confidence 





























....










...





















......



Template Conservation 
   
  
 
 

    
 

 
 


   .... 
 
                                          
Template Sequence  PFTEIKSGFLERRSKFLKSYSKGYYVLTPN. . . . FLHEFKTADRKKDLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDA
Template Known Secondary structure 



S
SSSSS
SS....SSS
TTT

S
SGGG



SSSS

TTS
S
Template Predicted Secondary structure 










....




































Template SS confidence 















































































   466...470.........480.........490..... ....500.........510.........520.........530.........540.
 
   449450.........460.........470.........480......
Predicted Secondary structure 












Query SS confidence 





































Query Sequence  FQIVERALPCLATVTYLCAPSQESYVEWINSLKAQCDS
Query Conservation 


            
    
 

   

  

    
Alig confidence 





.....


























Template Conservation        .....     
 
 
  
   
  

    

Template Sequence  KFVLHA. . . . . KHNWVFKADSYESMMSWFDNLKILTST
Template Known Secondary structure  .....


SSTT


Template Predicted Secondary structure 

.....





Template SS confidence 





































   542..... ..550.........560.........570....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions