Job Description Q8IR23 Confidence 99.62% Date Tue Jan 22 11:23:02 GMT 2013 Rank 108 Aligned Residues 115 % Identity 13% Template c3l9bA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:otoferlin; PDBTitle: crystal structure of rat otoferlin c2a Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		503	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.		.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560			.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.																		.	.
Query SS confidence																																											.																		.	.
Query Sequence		C	L	N	L	H	V	L	E	A	H	R	L	P	F	K	L	V	P	H	P	Y	C	S	I	S	L	N	Q	V	K	V	G	K	T	R	V	K	I	A	P	E	.	P	V	W	E	E	E	F	V	L	D	D	V	P	P	D	V	V	.	.	S	L	T	I	T	L	I	S	R	G	K	R	G	K	D	S	E	V	A
Query Conservation																																											.																		.	.
Alig confidence																	.	.																									.																		.	.
Template Conservation																	.	.
Template Sequence		A	L	I	V	H	L	K	T	V	S	E	L	R	G	R	.	.	A	D	R	I	A	K	V	T	F	R	G	Q	S	F	Y	S	R	V	L	E	N	C	E	D	V	A	D	F	D	E	T	F	R	W	P	V	A	S	S	I	D	R	N	E	V	L	E	I	Q	I	F	N	Y	S	K	V	F	S	N	K	L	I	G
Template Known Secondary structure												S			S		.	.										T	T													S													S	S				T	T												T	T	S
Template Predicted Secondary structure																	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	T	I	D	L	S	S	L	K	N	G	Q	E	T	E	G	W	Y	Q	L	T	G	M	T	P	M	G	E	W	G	S	L	R	L	R	M	R	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	F	R	M	V	L	Q	K	V	V	E	E	N	R	V	E	V	S	D	T	L	I	D	D	N	N	A	I	I	K	T	S	L	S	M	E	V	R	Y	Q
Template Known Secondary structure							S							S											T	T	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions