Job Description Q8IR23 Confidence 99.72% Date Tue Jan 22 11:23:02 GMT 2013 Rank 102 Aligned Residues 79 % Identity 22% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.					.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																																												.										.	.	.	.
Query SS confidence																																												.										.	.	.	.
Query Sequence		P	W	F	H	P	N	C	T	K	N	E	A	V	D	M	L	V	K	A	G	P	G	S	F	L	V	R	P	S	D	N	S	P	G	D	Y	S	L	F	F	H	I	.	N	N	Q	I	Q	R	F	R	I	.	.	.	.	E	K	K	G	V	R	Y	L	M	G	G	R	T	F	E	C	L	D	A	V	I	N	R	Y
Query Conservation																																												.										.	.	.	.
Alig confidence						.																																						.										.	.	.	.
Template Conservation						.
Template Sequence		P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K	E	X	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L	D	Q	I	I	V	E	Y
Template Known Secondary structure		T	T	B		.												T	T	S		T	T									S	T	T											T	T																				S	S	S				S	S
Template Predicted Secondary structure						.
Template SS confidence
		11	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		327	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	E	Q	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	N	K	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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