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| Job Description | Q8IR23 | | Confidence | 99.08% | Date | Tue Jan 22 11:23:02 GMT 2013 |
| Rank | 221 | Aligned Residues | 102 |
| % Identity | 24% | Template | c3fdwA_ |
| PDB info |
PDB header:lipid binding protein | Chain: A: PDB Molecule:synaptotagmin-like protein 4; |
PDBTitle: crystal structure of a c2 domain from human synaptotagmin-2 like protein 4
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| Resolution | 2.20 Å |
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502 | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | |
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. | 520 | . | . | . | . | . | . | . | . | |
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. | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | |
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| Predicted Secondary structure |   |
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| Query Sequence |   |
R | C | L | N | L | H | V | L | E | A | H | R | L | P | F | K | L | . |
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N | Q | V | K | V | G | K | T | R | V | K | I | A | P | . |
E | P | V | W | E | E | E | F | V | L | D | D | . |
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V | P | P | D | V | V | S | L | T | I | T | L | I | S | R | G |
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| Template Conservation |   |
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| Template Sequence |   |
Q | S | L | V | V | H | V | K | E | C | H | Q | L | A | Y | A | D | E | A | K | K | R | S | N | P | Y | V | K | T | Y | L | L | P | D | K | S | R | Q | G | K | R | K | T | S | I | K | R | D | T | V | N | P | L | Y | D | E | T | L | R | Y | E | I | P | E | S | L | L | A | Q | R | T | L | Q | F | S | V | W | H | H | G |
| Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  |  |  | S |
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| Template Predicted Secondary structure |   |
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| Template SS confidence |   |
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371 | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 |
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571 | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . |
| Predicted Secondary structure |   |
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| Query SS confidence |   |
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| Query Sequence |   |
K | R | G | K | D | S | E | V | A | E | L | T | I | D | L | S | S | L | K | N | G | Q | E | T | E | G | W | Y | Q | L | T | G | M |
| Query Conservation |   |
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| Alig confidence |   |
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| Template Conservation |   |
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| Template Sequence |   |
R | F | G | R | N | T | F | L | G | E | A | E | I | Q | M | D | S | W | K | L | D | K | K | L | D | H | C | L | P | L | H | G | K |
| Template Known Secondary structure |   |
G | G | G |
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| Template Predicted Secondary structure |   |
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| Template SS confidence |   |
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451 | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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