Return to main results Retrieve Phyre Job Id

Job DescriptionQ8IR23
Confidence91.58%DateTue Jan 22 11:23:02 GMT 2013
Rank299Aligned Residues103
% Identity17%Templatec3a98B_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:engulfment and cell motility protein 1; PDBTitle: crystal structure of the complex of the interacting regions of dock22 and elmo1
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   383.. ....390.........400.........410.........420.... .....430.... .... .440.........
Predicted Secondary structure  .























.......



.
....








Query SS confidence 


.






































. . . . . . .









.



. . . .










Query Sequence  HHG. HLNKKSDKTTKWKQLYFALINDGSETQLCFYDNPKKTKP. . . . . . . KGLIDLSCAY. LYQC. . . . HDSLWERPYCF
Query Conservation 
 
. 
       
 

    

        
        
 
.......

 



 
 .
  
....
 

  
  

Alig confidence 


.


















..

















.......









.



....










Template Conservation   




 
    
   
  
 

..
 
 
 
   
        
  
 
   
 

 
  
  
   
          
Template Sequence  VEGTCFRKLNARRRQDKFWYCRL. . SPNHKVLHYGDLEESPQGEVPHDSLQDKLPVADIKAVVTGKDCPHXNKEVLELAF
Template Known Secondary structure 

SS

TT

S..
TTSS

B
SS
B

B

S

GGGGGGSTT


TTGGG
Template Predicted Secondary structure 













..



























Template SS confidence 















































































   557..560.........570......... 580.........590.........600.........610.........620.........630....
 
   450.........460.........470.........480.........490.
Predicted Secondary structure 

















Query SS confidence 









































Query Sequence  QIVERALPCLATVTYLCAPSQESYVEWINSLKAQCDSQLSRA
Query Conservation 

            
    
 

   

  

    
     
Alig confidence 





....































Template Conservation 

    ....   
 


     
 





  
      
 
Template Sequence  SILYDS. . . . NCQLNFIAPDKHEYCIWTDGLNALLGKDXXSD
Template Known Secondary structure  TT....T
SSTT




Template Predicted Secondary structure 

....










Template SS confidence 









































   643..... .650.........660.........670.........680
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions