Return to main results Retrieve Phyre Job Id

Job DescriptionQ8IR23
Confidence99.57%DateTue Jan 22 11:23:02 GMT 2013
Rank110Aligned Residues124
% Identity23%Templatec2r09A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cytohesin-3; PDBTitle: crystal structure of autoinhibited form of grp1 arf gtpase exchange2 factor
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   355....360.........370.. .......380.........390.........400.........410.........420.......
Predicted Secondary structure 

.......






























Query SS confidence 

















. . . . . . .






















































Query Sequence  VEKAAEKIYATLRECRDQ. . . . . . . IGLKKIKGIKHHGHLNKKSDKTTKWKQLYFALINDGSETQLCFYDNPKKTKPKGL
Query Conservation                    .......     
    
 
 
       
 

    

        
        
 


 
Alig confidence 

















.......


































....















Template Conservation      
  

  
         
             




 
     









   .... 
 



  
  
 
 
Template Sequence  PEELLRNLYESIKNEPFKIPEDDGNDLTYTFFNPDREGWLLKLGGRVKTWKRRWFILTDN. . . . CLYYFEYTTDKEPRGI
Template Known Secondary structure 
S



TT

S

GGG






SSS

TT....SSTT
SS
S
Template Predicted Secondary structure 




































....






Template SS confidence 















































































   232.......240.........250.........260.........270.........280.........290. ........300.......
 
   428.430.........440.........450....... ..460.........470.........480....
Predicted Secondary structure 

















.................






Query SS confidence 





























. . . . . . . . . . . . . . . . .


























Query Sequence  IDLSCAYLYQCHDSLWERPYCFQIVERALP. . . . . . . . . . . . . . . . . CLATVTYLCAPSQESYVEWINSLKAQC
Query Conservation 



 
 
  

 

  
  



      .................      
    
 

   

  

   
Alig confidence 













..













.................


























Template Conservation 
 
    
      ..       
                          
 
 
 





   

 

  

Template Sequence  IPLENLSIREVEDP. . RKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWXKSIKASI
Template Known Secondary structure 
TT


S..S
SS
SSSTT





TTS



S

SS
Template Predicted Secondary structure 







..




























Template SS confidence 









































































   308.310.........320. ........330.........340.........350.........360.........370.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions