Job Description Q8IR23 Confidence 99.78% Date Tue Jan 22 11:23:02 GMT 2013 Rank 90 Aligned Residues 113 % Identity 22% Template c2izvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:suppressor of cytokine signaling 4; PDBTitle: crystal structure of socs-4 in complex with elongin-b and2 elongin-c at 2.55a resolution Resolution 2.55 Å

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	M	L	N	G	E	R	P	A	I	I	A	P	P	E	S	E	W	Y	H	G	R	L	D	R	Y	S	A	E	S	R	L	R	G	S	S	K	L	G	S	Y	L	V	R	E	S	D	R	K	P	G	S	Y	V	L	S	Y	Y	G	R	T	G	I	N	H	F	R	I	T	A	V	C	G	D	F	Y	I	G	G	R
Query Conservation
Alig confidence																																				.
Template Conservation																																				.
Template Sequence		Y	F	Q	S	M	L	V	P	D	L	L	Q	I	N	N	N	P	C	Y	W	G	V	M	D	K	Y	A	A	E	A	L	L	E	G	.	K	P	E	G	T	F	L	L	R	D	S	A	Q	E	D	Y	L	F	S	V	S	F	R	R	Y	S	R	S	L	H	A	R	I	E	Q	W	N	H	N	F	S	F	D	A	H
Template Known Secondary structure		S							T	T								T	T															T	T	.			T	T								S	S	T	T		S								T	T											T	T				S		T	T
Template Predicted Secondary structure																																				.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		147						.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure			.	.	.	.	.																						.
Query SS confidence			.	.	.	.	.																						.
Query Sequence		Q	.	.	.	.	.	F	I	S	L	S	D	L	V	G	Y	Y	T	S	C	S	D	L	L	K	R	E	.	R	L	A	I	P	V	A	P	P	E	P	V
Query Conservation			.	.	.	.	.																						.
Alig confidence			.	.	.	.	.																						.
Template Conservation
Template Sequence		D	P	C	V	F	H	S	P	D	I	T	G	L	L	E	H	Y	K	D	P	S	A	C	M	F	F	E	P	L	L	S	T	P	L	I	R	T	F	P	F
Template Known Secondary structure			T	T	S			B	S	S								T			G	G	G			T	T	S											S
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions