Job Description Q8IR23 Confidence 99.33% Date Tue Jan 22 11:23:02 GMT 2013 Rank 163 Aligned Residues 98 % Identity 22% Template c2dtcB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:ral guanine nucleotide exchange factor ralgps1a; PDBTitle: crystal structure of ms0666 Resolution 1.70 Å

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		382	.	.	.	.	.	.	.	390					.	.	.	.	.	.				.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.										.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure											.	.	.	.							.	.	.																												.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.							.	.	.																												.	.	.	.	.	.	.	.	.
Query Sequence		K	H	H	G	H	L	N	K	K	.	.	.	.	S	D	K	T	T	K	.	.	.	W	K	Q	L	Y	F	A	L	I	N	D	G	S	E	T	Q	L	C	F	Y	D	N	P	K	K	T	K	.	.	.	.	.	.	.	.	.	P	K	G	L	I	D	L	S	C	A	Y	L	Y	Q	C	H	D	S	L	W	E	R
Query Conservation											.	.	.	.							.	.	.																												.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.							.	.	.												.	.	.	.													.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																																			.	.	.	.																																							.	.
Template Sequence		T	X	E	G	P	L	R	R	K	T	L	L	K	E	G	R	K	P	A	L	S	S	W	T	R	Y	W	V	V	L	S	G	A	.	.	.	.	T	L	L	Y	Y	G	A	K	S	L	R	G	T	D	R	K	H	Y	K	S	T	P	G	K	K	V	S	I	V	G	W	X	V	Q	L	P	D	D	.	.	P	E	H
Template Known Secondary structure														B	T	T	B			S													T	T	.	.	.	.							B	S	S	S	S			S	G	G	G	B		S	S		S						T	T									.	.	T	T	S
Template Predicted Secondary structure																																			.	.	.	.																																							.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	C	F	Q	I	V	E	R	A	L	P	C	L	A	T	V	T	Y	L	C	A	P	S	Q	E	S	Y	V	E	W	I	N	S	L	K	A	Q	C	D	S	Q	L
Query Conservation
Alig confidence														.	.	.
Template Conservation														.	.	.
Template Sequence		P	D	I	F	Q	L	N	N	P	D	K	G	.	.	.	N	V	Y	K	F	Q	T	G	S	R	F	H	A	I	L	W	H	K	H	L	D	D	A	C	K	S	S	R
Template Known Secondary structure		T	T							T	T	S		.	.	.	S							S	S																T	S
Template Predicted Secondary structure														.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions