Return to main results Retrieve Phyre Job Id

Job DescriptionQ8IR23
Confidence99.40%DateTue Jan 22 11:23:02 GMT 2013
Rank136Aligned Residues106
% Identity20%Templatec2d9wA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:docking protein 2; PDBTitle: solution structure of the ph domain of docking protein 22 from human
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   380.........390.... .....400........ .410.........420. ........430.........440...... ..
Predicted Secondary structure 








..






..







....















...
Query SS confidence 














. .













. .












. . . .
























. . .

Query Sequence  GIKHHGHLNKKSDKT. . TKWKQLYFALINDG. . SETQLCFYDNPKK. . . . TKPKGLIDLSCAYLYQCHDSLWERP. . . YC
Query Conservation     
 
 
       ..
 

    

    ..    
        ....
 


 



 
 
  

 

  
 ... 
Alig confidence 














..













..












....
























...

Template Conservation   




 
 
       
 







          
 
                
 
                     
Template Sequence  GAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVIRLSDCLRVAEAGGEASSPRDTSA
Template Known Secondary structure 
SS
B
SSSS
B



SSSS




S
SSS
S


GGG

S
SSS
SS
Template Predicted Secondary structure 




















































Template SS confidence 















































































   11........20.........30.........40.........50.........60.........70.........80.........90
 
   449450.........460.........470.........480.........490.
Predicted Secondary structure 

















Query SS confidence 










































Query Sequence  FQIVERALPCLATVTYLCAPSQESYVEWINSLKAQCDSQLSRA
Query Conservation 


            
    
 

   

  

    
     
Alig confidence 





.....









.




















Template Conservation 
 
 
 ..... 
    

  .

   

 

   
   
   
Template Sequence  FFLETK. . . . . ERLYLLAAPA. AERGDWVQAICLLAFSGPSSG
Template Known Secondary structure  S.....S

.TSS



Template Predicted Secondary structure 

.....


.






Template SS confidence 










































   91..... ...100...... ...110.........120.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions