Job Description Q8IR23 Confidence 25.01% Date Tue Jan 22 11:23:02 GMT 2013 Rank 375 Aligned Residues 45 % Identity 18% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		360	.	.	.	.	.	.	.	.	.	370	.	.					.	.	.	.	.	.	.	380	.	.	.								.	.	.	.	.	.													390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.												.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.												.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	I	Y	A	T	L	R	E	C	R	D	Q	.	.	.	.	I	G	L	K	K	I	K	G	I	K	H	.	.	.	.	.	.	.	H	G	H	L	N	K	.	.	.	.	.	.	.	.	.	.	.	.	K	S	D	K	T	T	K	W	K	Q	L	Y	F	A	L	I	N
Query Conservation															.	.	.	.												.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.												.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Conservation																																																												.	.
Template Sequence		V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q	L	K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	.	.	V	F	P	E	N	F	T	E	R	V
Template Known Secondary structure					S	S		B				S	T	T				B		S	S									S		G	G	G	S		T	T												T	G	G	G	G	G	G	T			.	.				S	T	T
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.			.	.	.	.	.	.	.	.	480	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions