Job Description Q8IR23 Confidence 29.29% Date Tue Jan 22 11:23:02 GMT 2013 Rank 359 Aligned Residues 52 % Identity 12% Template c1kq1W_ PDB info PDB header:translation Chain: W: PDB Molecule:host factor for q beta; PDBTitle: 1.55 a crystal structure of the pleiotropic translational2 regulator, hfq Resolution 1.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	K	I	Y	A	T	L	R	E	C	R	D	Q	I	G	L	K	K	I	K	G	I	K	H	H	G	H	L	N	K	K	S	D	K	T	T	K	W	K	Q	L	Y	F	A	L	I	N	D	G	S	E	T	Q	L	C	F	Y	D	N
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.
Template Sequence		Q	D	K	A	L	E	N	F	K	A	N	Q	T	E	V	T	V	F	F	L	N	G	F	Q	M	K	G	V	I	.	.	.	.	.	.	.	.	E	E	Y	D	K	Y	V	V	S	L	N	S	Q	G	K	Q	H	L	I	Y	K	H	A
Template Known Secondary structure												T	T								T	T	S								.	.	.	.	.	.	.	.					S	S							T	T							G	G	G
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.									.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions