Job Description Q8IR23 Confidence 95.24% Date Tue Jan 22 11:23:02 GMT 2013 Rank 288 Aligned Residues 89 % Identity 16% Template c1foeA_ PDB info PDB header:signaling protein, immune system/signali Chain: A: PDB Molecule:t-lymphoma invasion and metastasis inducing PDBTitle: crystal structure of rac1 in complex with the guanine2 nucleotide exchange region of tiam1 Resolution 2.80 Å

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		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.																					.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.				.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Query Sequence		D	K	T	T	K	W	K	Q	L	Y	F	A	L	I	N	D	G	S	E	T	Q	L	C	F	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	P	K	K	T	K	P	K	G	L	I	D	L	S	C	A	Y	L	Y	Q	C	H	D	S	.	.	.	L	W	E	R	P	Y	C
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Alig confidence																		.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Conservation																		.	.	.	.
Template Sequence		G	K	W	K	K	E	P	E	L	A	A	F	V	F	K	T	.	.	.	.	A	V	V	L	V	Y	K	D	G	S	K	Q	K	K	K	L	V	G	S	H	R	L	S	I	Y	E	E	W	D	P	F	R	F	R	H	X	I	P	T	E	A	L	Q	V	R	A	L	P	S	A	D	A	E	A	N	A	V	C	E	I
Template Known Secondary structure			T	T		S	S									T	T	.	.	.	.												S			S	S				T	T	T	T		S	S		S		S									G	G	G									T	T	T	T	S
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		1283	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.					.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	I	V	E	R	A	L	P	C	L	A	T	V	T	Y	L	C	A	P	S	Q	E	S	Y	V	E	W	I	N	S	L	K	A	Q	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	H	V	K	S	E	S	E	G	R	P	E	R	V	F	H	L	C	C	S	S	P	E	S	R	K	D	F	L	K	S	V	H	S	I	L
Template Known Secondary structure						B	T	G	G	G	B										S	S
Template Predicted Secondary structure
Template SS confidence
		1359	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions