Job Description Q1WWC9 Confidence 96.72% Date Tue Jan 22 11:33:30 GMT 2013 Rank 404 Aligned Residues 152 % Identity 9% Template c4gkwB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:spindle assembly abnormal protein 6; PDBTitle: crystal structure of the coiled-coil domain of c. elegans sas-6 Resolution 3.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	Q	R	I	C	D	T	R	A	G	V	T	N	V	K	T	V	I	D	G	M	R	T	Q	R	D	T	S	M	S	E	M	S	Q	L	K	A	R	I	K	E	Q	N	A	K	L	L	Q	L	T	Q	E	R	A	K	W	E	A	K	S	K	A	S	G	A	A	L	G	G	E	N	A	Q	Q	E	Q	L	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	D	E	V	A	D	L	K	Q	D	T	E	S	L	Q	K	Q	L	E	E	N	Q	E	E	L	E	I	V	G	N	M	L	R	E	E	Q	G	K	V	D	Q	L	Q	K	R	N	V	A	H	Q	K	E	I	G	K	L	R	A	E	L	G	T	A	Q	R	N	L	E	K	A	D	Q	L	L	K	R	N	S	Q
Template Known Secondary structure		S		S	S																																																																			T	T	S	S	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
					551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	A	F	A	H	K	Q	L	I	I	N	Q	I	K	D	K	V	E	N	I	S	K	E	I	E	S	K	K	E	D	I	N	T	N	D	V	Q	M	S	E	L	K	A	E	L	S	A	L	I	T	K	C	E	D	L	Y	K	E	Y	D	V	Q	R	T	S	V	L	E	L	K	Y	N	R
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		Q	Q	N	Q	Q	S	L	D	M	R	K	L	G	E	L	E	A	D	L	K	E	K	D	S	M	V	E	S	L	T	E	T	I	G	I	L	R	K	E	L	E	N	E	K	L	K	A	A	E	N	M	D	S	F	E	K	L	S	M	E	N	E	N	L	K	E	K	I	A	H	Y	R	A	Q	R
Template Known Secondary structure		S	S	T																																																																					T	S
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions