Job Description Q1WWC9 Confidence 96.83% Date Tue Jan 22 11:33:30 GMT 2013 Rank 393 Aligned Residues 177 % Identity 9% Template c3ojaA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:leucine-rich immune molecule 1; PDBTitle: crystal structure of lrim1/apl1c complex Resolution 2.70 Å

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		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	Q	R	I	C	D	T	R	A	G	V	T	N	V	K	T	V	I	D	G	M	R	T	Q	R	D	T	S	M	S	E	M	S	Q	L	K	A	R	I	K	E	Q	N	A	K	L	L	Q	L	T	Q	E	R	A	K	W	E	A	K	S	K	A	S	G	A	A	L	G	G	E	N	A	Q	Q	E	Q	L	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	R	L	I	A	L	K	R	K	E	H	A	L	L	S	T	E	R	L	E	C	E	R	E	N	Q	A	R	Q	R	E	I	D	A	L	K	E	Q	Y	R	T	V	I	D	Q	V	T	L	R	K	Q	A	K	I	T	L	E	Q	K	K	K	A	L	D	E	Q	V	S	N	G	R	R	A	H	A	E	L	D	G
Template Known Secondary structure															S																										T
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		551	.	.	.	.	.	.	.	.	560	.	.		.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		A	F	A	H	K	Q	L	I	I	N	Q	I	.	K	D	K	V	E	N	I	S	K	E	I	E	S	K	K	E	D	I	N	T	N	D	V	Q	M	S	E	L	K	A	E	L	S	A	L	I	T	K	C	E	D	L	Y	K	E	Y	D	V	Q	R	T	S	V	L	E	L	K	Y	N	R	K	N	E	T	S	V	S
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		T	L	Q	Q	A	V	G	Q	I	E	L	Q	H	A	T	E	E	Q	S	P	L	Q	L	L	R	A	I	V	K	R	Y	E	E	M	Y	V	E	Q	Q	S	V	Q	N	N	A	I	R	D	W	D	M	Y	Q	H	K	E	T	Q	L	A	E	E	N	A	R	L	K	K	L	N	G	E	A	D	L	A	L	A	S	A
Template Known Secondary structure							T	T	S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
		630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	W	D	T	G	S	S	S	A	W	E	E	T	G	T	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	T	L	Q	E	L	V	V	R	E	Q	N	L	A	S	Q	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions