Return to main results Retrieve Phyre Job Id

Job DescriptionQ1WWC9
Confidence96.84%DateTue Jan 22 11:33:30 GMT 2013
Rank392Aligned Residues101
% Identity25%Templatec2kycA_
PDB info PDB header:calcium binding proteinChain: A: PDB Molecule:parvalbumin, thymic cpv3; PDBTitle: solution structure of ca-free chicken parvalbumin 3 (cpv3)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60.........70.........80.........90.........100.........110.........120.
Predicted Secondary structure 



















































Query SS confidence 















































































Query Sequence  LQSQLPPLILGQIWALADTDSDGKMNINEFSIACKLINLKLRGMDVPKVLPPSLLSSLTGDVPSMTPRGSTSSLSPLDPL
Query Conservation    
 
    
  

 
 
    
 
   

  

 

     
   
  

  
        
   
           
 
Alig confidence 












..

















...............................................
Template Conservation      

  

   ..         


 

   ...............................................
Template Sequence  LTDILSPSDIAAA. . LRDCQAPDSFSPKKFFQI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTSSS
..TTS
STTT

...............................................
Template Predicted Secondary structure 





..






...............................................
Template SS confidence 















































































   2.......10.... .....20.........30..
 
   122.......130.........140.........150.........160.........170.........180.........190.........200.
Predicted Secondary structure 


































































Query SS confidence 















































































Query Sequence  KGIVPAVAPVVPVVAPPVAVATVISPPGVSVPSGPTPPTSNPPSRHTSISERAPSIESVNQGEWAVQAAQKRKYTQVFNA
Query Conservation      
         
                                                  
    
      
  
Alig confidence  ...............................................................
















Template Conservation  ...............................................................          
   
  
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SGMSKKSSSQLKEIFRI
Template Known Secondary structure  ...............................................................T
TT

SSS
SS
Template Predicted Secondary structure  ...............................................................





Template SS confidence 















































































   33......40.........
 
   202.......210.........220... ......230.........240.........250....
Predicted Secondary structure 











.....











Query SS confidence 





















. . . . .






























Query Sequence  NDRTRSGYLTGSQARGVLVQSK. . . . . LPQVTLAQIWTLSDIDGDGRLNCDEFILAMF
Query Conservation   
    
             
 .....
    

 

 


    
 
   

  

 
Alig confidence 





















.....






























Template Conservation 

 
  
 
   

   
             
        
 
 

 
   

   
 
Template Sequence  LDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQ
Template Known Secondary structure  S
S

SS


GGGTTTSSSS




TTTTTTT

SSSS


SS
Template Predicted Secondary structure 




















Template SS confidence 

























































   50.........60.........70.........80.........90.........100.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions