Job Description Q1WWC9 Confidence 96.90% Date Tue Jan 22 11:33:30 GMT 2013 Rank 389 Aligned Residues 125 % Identity 18% Template c2f33A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:calbindin; PDBTitle: nmr solution structure of ca2+-loaded calbindin d28k Resolution UNK

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	G	F	F	L	Q	S	Q	L	P	P	L	I	L	G	Q	I	W	A	L	A	D	T	D	S	D	G	K	M	N	I	N	E	F	S	I	A	C	K	L	I	N	L	K	L	R	G	M	D	V	P	K	V	L	P	P	S	L	L	S	S	L	T	G	D	V	P	S	M	T	P	R	G	S	T	S	S	L	S
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	S	H	L	Q	S	S	L	I	T	A	S	Q	F	F	E	I	W	L	H	F	D	A	D	G	S	G	Y	L	E	G	K	E	L	Q	N	L	I	Q	E	L	L	Q	A	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T	T	S																T	T		S	S	S	B		S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	D	P	L	K	G	I	V	P	A	V	A	P	V	V	P	V	V	A	P	P	V	A	V	A	T	V	I	S	P	P	G	V	S	V	P	S	G	P	T	P	P	T	S	N	P	P	S	R	H	T	S	I	S	E	R	A	P	S	I	E	S	V	N	Q	G	E	W	A	V	Q	A	A	Q	K	R	K	Y	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	G	L	E	L	S	P	E	M	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																																							49	50	.	.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.												220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	F	N	A	N	D	R	T	R	S	G	Y	L	T	G	S	Q	A	R	G	V	L	.	.	.	.	.	.	.	.	.	.	.	V	Q	S	K	L	P	Q	V	T	L	A	Q	I	W	T	L	S	D	I	D	G	D	G	R	L	N	C	D	E	F	I	L	A	M	F	L	C	E	K	A	M	A	G	E
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	F	V	D	Q	Y	G	Q	R	D	D	G	K	I	G	I	V	E	L	A	H	V	L	P	T	E	E	N	F	L	L	L	F	R	C	Q	Q	L	K	S	C	E	E	F	M	K	T	W	R	K	Y	D	T	D	H	S	G	F	I	E	T	E	E	L	K	N	F	L	K	D	L	L	E	K	A	N	K	T
Template Known Secondary structure								T	T	G	G	G			B									T	T	S		T	T						G	G	G	T	S	S										T	T	S	S	T	T	T		S	S	B																	T	S
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions