Return to main results Retrieve Phyre Job Id

Job DescriptionQ1WWC9
Confidence95.80%DateTue Jan 22 11:33:30 GMT 2013
Rank458Aligned Residues140
% Identity22%Templatec2f2oB_
PDB info PDB header:metal binding proteinChain: B: PDB Molecule:calmodulin fused with calmodulin-binding domain PDBTitle: structure of calmodulin bound to a calcineurin peptide: a2 new way of making an old binding mode
Resolution2.17 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20......... 30.........40.... .....50.........60.........70.........80......
Predicted Secondary structure 






.


..















Query SS confidence 



















.














. .









































Query Sequence  VTPRERLKYQEQFRALQPQA. GFVTGAQAKGFFLQS. . QLPPLILGQIWALADTDSDGKMNINEFSIACKLINLKLRGMD
Query Conservation 
           
       .
   
  
   
  
.. 
    
  

 
 
    
 
   

  

 

     
  
Alig confidence 



















.














..



































......
Template Conservation 

      
   
   
 
 

 

  

   
                                         ......
Template Sequence  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK. . . . . .
Template Known Secondary structure 

SS
SS
B
TT




TT
SSSB
......
Template Predicted Secondary structure 




































......
Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.......
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
Predicted Secondary structure 















































































Query SS confidence 















































































Query Sequence  VPKVLPPSLLSSLTGDVPSMTPRGSTSSLSPLDPLKGIVPAVAPVVPVVAPPVAVATVISPPGVSVPSGPTPPTSNPPSR
Query Conservation   
  

  
        
   
           
     
         
                              
Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
Template Predicted Secondary structure  ................................................................................
Template SS confidence 















































































  
 
   167..170.........180.........190.........200.........210.........220.........230.........240......
Predicted Secondary structure 













































Query SS confidence 















































































Query Sequence  HTSISERAPSIESVNQGEWAVQAAQKRKYTQVFNANDRTRSGYLTGSQARGVLVQSKLPQVTLAQIWTLSDIDGDGRLNC
Query Conservation                      
    
      
   
    
             
 
    

 

 


    
 
  
Alig confidence  .....................



































....


















Template Conservation  .....................                          
         .... 
   
   
 
 

 
  
Template Sequence  . . . . . . . . . . . . . . . . . . . . . DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG. . . . EVDEMIREADIDGDGQVNY
Template Known Secondary structure  .....................
TTSSS
T....


S
TT
SSS
Template Predicted Secondary structure  .....................

























....








Template SS confidence 















































































   78.80.........90.........100.........110... ......120.........130..
 
   247..250.........260
Predicted Secondary structure 
Query SS confidence 













Query Sequence  DEFILAMFLCEKAM
Query Conservation   

  

 
     
Alig confidence 













Template Conservation   

   
       
Template Sequence  EEFVQMMTAARKEV
Template Known Secondary structure 

Template Predicted Secondary structure 

Template SS confidence 













   139140.........150..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions