Return to main results Retrieve Phyre Job Id

Job DescriptionQ1WWC9
Confidence96.78%DateTue Jan 22 11:33:30 GMT 2013
Rank403Aligned Residues63
% Identity25%Templatec2e6wA_
PDB info PDB header:metal binding proteinChain: A: PDB Molecule:calsenilin; PDBTitle: solution structure and calcium binding properties of ef-2 hands 3 and 4 of calsenilin
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20...... ...30.........40.... .....50.........60.........70.....
Predicted Secondary structure 


.





..............











Query SS confidence 















.

















. . . . . . . . . . . . . .






























Query Sequence  TPRERLKYQEQFRALQ. PQAGFVTGAQAKGFFLQS. . . . . . . . . . . . . . QLPPLILGQIWALADTDSDGKMNINEFSIAC
Query Conservation             
    .   
   
  
   
  
.............. 
    
  

 
 
    
 
   

  

Alig confidence 







..





.

















..............






























Template Conservation 
 


   .. 
   
 



 
   

                                   
 
 

 

  

    
Template Sequence  TVHEKLKW. . AFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDRNQDGVVTIEEFLEAC
Template Known Secondary structure 
S..
SS
SS
S
S


SS


S




SSS
SS
SSS
Template Predicted Secondary structure 
..




























Template SS confidence 















































































   162....... 170.........180.........190.........200.........210.........220.........230.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions