Return to main results Retrieve Phyre Job Id

Job DescriptionQ1WWC9
Confidence99.48%DateTue Jan 22 11:33:30 GMT 2013
Rank38Aligned Residues59
% Identity42%Templatec2df6A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rho guanine nucleotide exchange factor 7; PDBTitle: crystal structure of the sh3 domain of betapix in complex2 with a high affinity peptide from pak2
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1023......1030.........1040.........1050.........1060.........1070.........1080.
Predicted Secondary structure 





























Query SS confidence 


























































Query Sequence  EQILDKVIALYPYKAQNDDELSFDKDDIISVLGRDEPEWWRGELNGLSGLFPSNYVGPF
Query Conservation          
 
 
 
   




  

 
 
  
    

 
   
  
 





 
 
Alig confidence 


























































Template Conservation 

    
 

 

      


   

 
 

      
      
  
 

  


 
Template Sequence  GPLGSVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREI
Template Known Secondary structure 

TT
SS
B

SSTTB

B
TT

SSSTTGGG
Template Predicted Secondary structure 

























Template SS confidence 


























































   5....10.........20.........30.........40.........50.........60...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions