Job Description Q1WWC9 Confidence 97.02% Date Tue Jan 22 11:33:30 GMT 2013 Rank 374 Aligned Residues 375 % Identity 8% Template c1jchC_ PDB info PDB header:ribosome inhibitor, hydrolase Chain: C: PDB Molecule:colicin e3; PDBTitle: crystal structure of colicin e3 in complex with its immunity protein Resolution 3.02 Å

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	S	L	T	G	D	V	P	S	M	T	P	R	G	S	T	S	S	L	S	P	L	D	P	L	K	G	I	V	P	A	V	A	P	V	V	P	V	V	A	P	P	V	A	V	A	T	V	I	S	P	P	G	V	S	V	P	S	G	P	T	P	P	T	S	N	P	P	S	R	H	T	S	I	S	E	R	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	A	P	V	A	F	G	F	P	A	L	S	T	P	G	A	G	G	L	A	V	S	I	S	A	G	A	L	S	A	A	I	A	D	I	M	A	A	L	K	G	P	F	K	F	G	L	W	G	V	A	L	Y	G	V	L	P	S	Q	I	A	K	D	D	P	N	M	M	S	K	I	V	T	S	L	P	A	D	D
Template Known Secondary structure				S						B	S	S	S			B			S	S	S		B			B	B			S			S	G	G	G	G						S			S	S	S					B								S	S	S	S				B						S				S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		176	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		S	I	E	S	V	N	Q	.	.	.	.	G	E	W	A	V	Q	A	A	Q	K	R	K	Y	T	Q	V	F	N	A	N	D	R	T	R	S	G	Y	L	T	G	S	Q	A	R	G	V	L	V	Q	S	K	L	P	Q	V	T	L	A	Q	I	W	T	L	S	D	I	D	G	D	G	R	L	N	C	D	E	F	I	L
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.																																																												.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	E	S	P	V	S	S	L	P	L	D	K	A	T	V	N	V	N	V	R	V	V	D	D	V	K	D	E	R	Q	N	I	S	V	V	S	G	V	P	M	S	V	P	V	V	D	A	K	P	T	E	R	P	G	V	F	T	A	S	I	P	G	A	P	V	L	N	I	S	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T							S		B								S	S	S			S		B		B		S	S	S						B							S	S	S	S							T	T	S				B				B	S	S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	F	L	C	E	K	A	M	A	G	E	K	I	P	V	T	L	P	Q	E	W	V	P	P	N	L	R	K	I	K	S	R	P	G	S	V	S	G	V	V	S	R	P	G	S	Q	P	A	S	R	H	A	S	V	S	S	Q	S	G	V	G	V	V	D	A	D	P	T	A	G	L	P	G	Q	T	S	F	E	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	N	S	T	P	A	V	Q	T	L	S	P	G	V	T	N	N	T	D	K	D	V	R	P	A	F	G	T	Q	G	G	N	T	R	D	A	V	I	R	F	P	K	D	S	G	H	N	A	V	Y	V	S	V	S	D	V	L	S	P	D	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S	S		T	T														S		S	S	T	T	S												S	S	S	S									B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	K	E	N	Y	V	K	G	Q	A	E	L	D	R	R	R	K	I	M	E	D	Q	Q	R	K	E	R	E	E	R	E	R	K	E	R	E	E	A	D	K	R	E	K	A	R	L	E	A	E	R	K	Q	Q	E	E	L	E	R	Q	L	Q	R	Q	R	E	I	E	M	E	K	E	E	Q	R	K	R	E	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	Q	R	Q	D	E	E	N	R	R	Q	Q	E	W	D	A	T	H	P	V	E	A	A	E	R	N	Y	E	R	A	R	A	E	L	N	Q	A	N	E	D	V	A	R	N	Q	E	R	Q	A	K	A	V	Q	V	Y	N	S	R	K	S	E	L	D	A	A	N	K	T	L	A	D	A	I	A	E	I	K	Q	F
Template Known Secondary structure																																																																																T	T
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	E	A	A	R	K	E	L	E	K	Q	R	Q	Q	E	W	E	Q	A	R	I	A	E	M	N	A	Q	K	E	R	E	Q	E	R	V	L	K	Q	K	A	H	N	T	Q	L	N	V	E	L	S	T	L	N	E	K	I	K	E	L	S	Q	R	I	C	D	T	R	A	G	V	T	N	V	K	T	V	I	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R	F	A	H	D	P	M	A	G	G	H	R	M	W	Q	M	A	G	L	K	A	Q	R	A	Q	T	D	V	N	N	K	Q	A	A	F	D	A	A	A	K	E	K	S	D	A	D	A	A	L	S	S	A	M	E	S	R	K	K	K	E	D	K	K	R	S	A	E	N	N	L	N	D	E	K	N	K	P	R	K
Template Known Secondary structure		G	G	G	T	T		S	S	S	S																																																								T	T	T					T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
		492	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	T	Q	R	D	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	K	D	Y	G	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		456	.	.	.	460	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions