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| Job Description | Q1WWC9 | | Confidence | 96.07% | Date | Tue Jan 22 11:33:30 GMT 2013 |
| Rank | 443 | Aligned Residues | 103 |
| % Identity | 10% | Template | c1deqF_ |
| PDB info |
PDB header:blood clotting | Chain: F: PDB Molecule:fibrinogen (gamma chain); |
PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution)
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| Resolution | 3.50 Å |
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| Predicted Secondary structure |   |
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| Query Sequence |   |
Q | K | A | H | N | T | Q | L | N | V | E | L | S | T | L | N | E | K | I | K | E | L | S | Q | R | I | C | D | T | R | A | G | V | T | N | V | K | T | V | I | . |
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D | G | M | R | T | Q | R | D | T | S | M | S | E | M | S | Q | L | K | A | R | I | K | E | Q | N | A | K | L | L | Q | L | T | Q | E | R | A |
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| Template Conservation |   |
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| Template Sequence |   |
L | N | N | Y | Q | T | S | V | D | K | D | L | R | T | L | E | G | I | L | Y | Q | V | E | N | K | T | S | E | A | R | E | L | V | K | A | I | Q | I | S | Y | N | P | D | Q | P | S | K | P | N | N | I | E | S | A | T | K | N | S | K | S | M | M | E | E | I | M | K | Y | E | T | L | I | S | T | H | E | S | T | I | R |
| Template Known Secondary structure |   |
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| T | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
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29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
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526 | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . |
| Predicted Secondary structure |   |
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| Query Sequence |   |
K | W | E | A | K | S | K | A | S | G | A | A | L | G | G | E | N | A | Q | Q | E | Q | L | N | A | A | F |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
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| Template Conservation |   |
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| Template Sequence |   |
F | L | Q | E | I | Y | N | S | N | S | Q | K | I | V | N | L | R | D | K | V | V | Q | L | E | A | N | C |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
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109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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