Return to main results Retrieve Phyre Job Id

Job DescriptionQ8IPW2
Confidence26.37%DateTue Jan 22 11:34:03 GMT 2013
Rank380Aligned Residues31
% Identity13%Templated1wi5a_
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40 .........50... ......60..
Predicted Secondary structure 





..




.



Query SS confidence 








. .












.








Query Sequence  DLRKNERYL. . LLDDSKHWWRVQN. SRNQSGYVP
Query Conservation 

 


 
 ..

   
  
    .  
  
 

Alig confidence 








..












.








Template Conservation   
  
  
 
 
  
 
 
  
 

     



Template Sequence  ALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLP
Template Known Secondary structure  T

TT

SS


SS
Template Predicted Secondary structure 











Template SS confidence 

































   196...200.........210.........220.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions