Job Description Q8IPW2 Confidence 96.53% Date Tue Jan 22 11:34:03 GMT 2013 Rank 326 Aligned Residues 134 % Identity 15% Template c3h41A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:nlp/p60 family protein; PDBTitle: crystal structure of a nlpc/p60 family protein (bce_2878) from2 bacillus cereus atcc 10987 at 1.79 a resolution Resolution 1.79 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.									.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.
Query Sequence		M	A	G	N	M	K	H	G	K	S	Q	D	D	V	C	Y	V	V	A	K	Y	D	Y	A	A	Q	G	A	Q	E	L	D	L	R	K	N	E	R	Y	L	L	L	D	D	S	K	H	W	W	R	V	.	.	.	.	.	.	.	.	Q	N	S	R	N	Q	S	G	Y	V	P	S	N	Y	V	K	K	E	K	P	S
Query Conservation																																																					.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.
Template Sequence		X	T	L	D	E	K	L	W	L	T	N	A	N	K	L	E	T	Q	A	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	E	V	T	V	V	D	K	K	G	D	W	V	K	V	L	V	H	G	Q	P	T	P	R	N	E	E	G	Y	P	G	W	X	P	E	K	Q	L	T	Y	N	.	.	.
Template Known Secondary structure													T	T								T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T										T	T							T	T			B	T	T	B	S	S								G	G	G					.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.															.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	D	S	I	K	K	K	V	K	K	G	S	G	S	K	T	L	P	N	C	S	P	S	R	Q	V	E	S	P	T	M	S	R	R	L	P	P	D	P	A	E	A	I	G	T	A	V	V	K	Y	N	Y	Q	A	Q	Q	P	D	E	L	S	L	T	K	G	T	R	I	L	I	L	E	K	S	N	D	G	W	W
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	F	A	D	K	T	N	E	P	F	V	L	V	T	K	P	T	A	I	L	Y	I	N	P	S	E	K	H	K	S	L	E	V	S	Y	N	T	R	L	P	L	L	S	E	D	T	I	S	Y	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T	S							S	S							S	S		T	T								T	T										S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																															131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	Q	S	G	N	S	V	G	W	F	P	S	N	Y	T	T	E	D	C	D	N	D	G	E	I	H	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	L	P	N	G	Q	K	A	W	L	R	K	N	D	G	T	F	Y	R	S	Q	N	D	I	P	T	P
Template Known Secondary structure					T	T	S							G	G	G					S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions