Job Description Q8IPW2 Confidence 99.74% Date Tue Jan 22 11:34:03 GMT 2013 Rank 124 Aligned Residues 87 % Identity 18% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

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		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.		.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		S	G	Q	P	I	E	R	P	N	L	A	G	K	S	W	Y	Y	G	A	I	T	R	S	Q	C	D	T	V	L	N	G	H	G	H	D	G	D	F	L	I	R	D	S	E	T	N	M	G	D	Y	S	V	S	L	K	A	P	G	R	N	.	K	H	F	R	V	H	V	E	Q	N	M	Y	C	I	G	Q	R	K	F
Query Conservation																																																														.
Alig confidence																			.															.	.										.																	.
Template Conservation																			.															.	.										.
Template Sequence		S	H	M	K	Y	T	N	P	R	F	Y	K	H	P	L	F	K	.	N	F	N	V	T	E	S	E	N	Y	L	R	S	S	.	.	T	D	D	F	L	I	R	K	G	.	S	R	H	G	Y	C	V	L	V	I	K	F	A	S	D	V	F	V	H	M	K	I	E	E	H	S	E	H	Y	T	C	S	N	K	H	F
Template Known Secondary structure						S	S			G	G	G	G	S	T	T			.														S	.	.	S									.	S	S	T	T										T	T											S	S					T	T
Template Predicted Secondary structure																			.															.	.										.
Template SS confidence
		780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.		.	.	.	800	.	.	.	.	.	.	.	.	.	810			.	.	.	.	.	.	.	.	.		820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.
		375	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	L	D	Q	L	V	D	H	Y	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	I	D	E	V	I	S	V	Y	V	R
Template Known Secondary structure		S	S								T
Template Predicted Secondary structure
Template SS confidence
		856	.	.	.	860	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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