Job Description Q8IPW2 Confidence 98.81% Date Tue Jan 22 11:34:03 GMT 2013 Rank 307 Aligned Residues 55 % Identity 22% Template c2xkxB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:disks large homolog 4; PDBTitle: single particle analysis of psd-95 in negative stain Resolution 22.9 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.						30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																													.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.																													.	.	.	.	.	.
Query Sequence		Q	D	D	V	C	Y	V	V	A	K	Y	D	Y	A	A	Q	G	A	Q	.	.	.	.	.	E	L	D	L	R	K	N	E	R	Y	L	L	L	D	D	S	K	H	W	W	R	V	Q	N	S	R	N	Q	.	.	.	.	.	.	S	G	Y	V	P	S	N	Y
Query Conservation																					.	.	.	.	.																													.	.	.	.	.	.
Alig confidence																					.	.	.	.	.																													.	.	.	.	.	.
Template Conservation
Template Sequence		P	K	R	G	F	Y	I	R	A	L	F	D	Y	D	K	T	K	D	C	G	F	L	S	Q	A	L	S	F	R	F	G	D	V	L	H	V	I	D	A	G	D	E	E	W	W	Q	A	R	R	V	H	S	D	S	E	T	D	D	I	G	F	I	P	S	K	R
Template Known Secondary structure		S	S	S	S	S					S	S		B						S				S	S	B			B		T	T										S	S	S									S	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions