Return to main results Retrieve Phyre Job Id

Job DescriptionQ8IPW2
Confidence27.91%DateTue Jan 22 11:34:03 GMT 2013
Rank379Aligned Residues21
% Identity10%Templatec2e6zA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcription elongation factor spt5; PDBTitle: solution structure of the second kow motif of human2 transcription elongation factor spt5
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.
Predicted Secondary structure 













Query SS confidence 




























Query Sequence  LRKNERYLLLDDSKHWWRVQNSRNQSGYV
Query Conservation 
 


 
 

   
  
      
  
 
Alig confidence 










........









Template Conservation 
  

 


  ........


  
 
 
Template Sequence  FQPGDNVEVCE. . . . . . . . GELINLQGKI
Template Known Secondary structure 

TTS
S........STTTT
Template Predicted Secondary structure 




........





Template SS confidence 




























   420.........430 .........440
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions