Job Description Q8IPW2 Confidence 99.76% Date Tue Jan 22 11:34:03 GMT 2013 Rank 112 Aligned Residues 77 % Identity 16% Template c2csqA_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:rim binding protein 2; PDBTitle: solution structure of the second sh3 domain of human rim-2 binding protein 2 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.									.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.																		.
Query SS confidence																						.	.	.	.	.	.	.	.																		.
Query Sequence		G	K	S	Q	D	D	V	C	Y	V	V	A	K	Y	D	Y	A	A	Q	G	.	.	.	.	.	.	.	.	A	Q	E	L	D	L	R	K	N	E	R	Y	L	L	L	D	D	.	S	K	H	W	W	R	V	Q	N	S	R	N	Q	S	G	Y	V	P	S	N	Y	V	K	K	E	K	P	S	L	F	D	S	I	K
Query Conservation																						.	.	.	.	.	.	.	.																		.
Alig confidence																						.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		G	A	E	E	L	P	A	R	I	F	V	A	L	F	D	Y	D	P	L	T	M	S	P	N	P	D	A	A	E	E	E	L	P	F	K	E	G	Q	I	I	K	V	Y	G	D	K	D	A	D	G	F	Y	R	G	E	T	C	A	R	L	G	L	I	P	C	N	M	V	S	E	I	Q	A	D	D	E	E	M	M	D
Template Known Secondary structure			S											S	S		B		T	T	T	T	S	S						T	T	B			B		T	T											T	T								T	T							T	T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		79	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	V	K	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	S	G	P	S	S
Template Known Secondary structure		S			S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions