Return to main results Retrieve Phyre Job Id

Job DescriptionQ8IPW2
Confidence99.13%DateTue Jan 22 11:34:03 GMT 2013
Rank305Aligned Residues58
% Identity12%Templatec1vyuB_
PDB info PDB header:ion transportChain: B: PDB Molecule:calcium channel beta-3 subunit; PDBTitle: beta3 subunit of voltage-gated ca2+-channel
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30 .........40.........50.... .....60...
Predicted Secondary structure 

















.......












...



Query SS confidence 
























. . . . . . .























. . .








Query Sequence  KHGKSQDDVCYVVAKYDYAAQGAQE. . . . . . . LDLRKNERYLLLDDSKHWWRVQNS. . . RNQSGYVPS
Query Conservation             






 
   

.......


 


 
 

   
  
     ... 
  
 

 
Alig confidence 
























.......























...








Template Conservation           
 


 




  
   
    



  



 
    
  




 
      




Template Sequence  ERAKHKPVAFAVRTNVSYCGVLDEECPVQGSGVNFEAKDFLHIKEKYSNDWWIGRLVKEGGDIAFIPS
Template Known Secondary structure  TTS


SS
GGG
TT
SSTT
B

TT

SSSSSTT



Template Predicted Secondary structure 











































Template SS confidence 



































































   53......60.........70.........80.........90.........100.........110.........120
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions