Job Description Q24145 Confidence 100.00% Date Tue Jan 22 11:35:34 GMT 2013 Rank 41 Aligned Residues 264 % Identity 23% Template c4fieB_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine/threonine-protein kinase pak 4; PDBTitle: full-length human pak4 Resolution 3.11 Å

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		658	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.		710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		E	P	E	K	L	V	L	D	R	E	I	G	H	G	E	F	G	S	V	H	S	G	W	L	L	R	K	S	G	A	G	E	E	S	R	L	E	V	A	I	K	M	L	S	D	E	H	S	N	K	Q	E	.	F	L	R	E	A	S	V	M	M	R	L	E	H	K	C	I	V	R	L	I	G	I	A	K	G	E	M
Query Conservation																																																						.
Alig confidence																									.	.	.	.	.	.	.																							.
Template Conservation																									.	.	.	.	.	.	.
Template Sequence		P	R	S	Y	L	D	N	F	I	K	I	G	E	G	S	T	G	I	V	C	I	A	T	.	.	.	.	.	.	.	V	R	S	S	G	K	L	V	A	V	K	K	M	D	L	R	K	Q	Q	R	R	E	L	L	F	N	E	V	V	I	M	R	D	Y	Q	H	E	N	V	V	E	M	Y	N	S	Y	L	V	G	D
Template Known Secondary structure		G	G	G	T											S	S								.	.	.	.	.	.	.		T	T	T											S	T	T		S	S	G	G	G														T	T	B										T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.								340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
			737	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	L	M	M	V	Q	E	L	A	P	L	G	S	M	L	Q	Y	I	L	D	H	G	H	E	I	T	A	N	A	E	L	K	V	W	A	S	Q	I	A	C	G	M	H	Y	L	E	S	Q	H	F	V	H	R	D	L	A	A	R	N	I	L	L	T	A	R	H	Q	A	K	I	S	D	F	G	M	S	R	S	L	R
Query Conservation		.
Alig confidence		.																						.	.	.
Template Conservation																								.	.	.
Template Sequence		E	L	W	V	V	M	E	F	L	E	G	G	A	L	T	D	I	V	T	H	T	R	.	.	.	M	N	E	E	Q	I	A	A	V	C	L	A	V	L	Q	A	L	S	V	L	H	A	Q	G	V	I	H	R	D	I	K	S	D	S	I	L	L	T	H	D	G	R	V	K	L	S	D	F	G	F	C	A	Q	V	S
Template Known Secondary structure											T	T										S		.	.	.																							T	T							S	T	T	T					T	T									T	T
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.				.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
		816	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.			.	.	.	.	.	890	.	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		P	G	S	T	E	Y	Q	F	T	Q	G	G	R	W	P	I	R	W	Y	A	P	E	S	F	N	L	G	I	F	S	H	A	S	D	V	W	S	F	G	V	T	I	W	E	M	F	S	L	G	A	P	P	Y	G	E	I	S	N	V	D	A	I	K	L	V	D	S	G	E	.	.	R	L	P	Q	P	N	L	C	P
Query Conservation																																																																							.	.
Alig confidence				.	.	.	.																																										.																						.	.
Template Conservation				.	.	.	.																																										.
Template Sequence		K	E	.	.	.	.	V	P	R	R	K	L	V	G	T	P	Y	W	M	A	P	E	L	I	S	R	L	P	Y	G	P	E	V	D	I	W	S	L	G	I	M	V	I	E	M	V	D	.	G	E	P	P	Y	F	N	E	P	P	L	K	A	M	K	M	I	R	D	N	L	P	P	R	L	K	N	L	H	K	V	S
Template Known Secondary structure		S	S	.	.	.	.				B						T	T	T							T	T			B		T																	.	S	S		T	T	T	T	S												S						S		T	T	S	S
Template Predicted Secondary structure				.	.	.	.																																										.
Template SS confidence
		467	.					.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
		894	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.			.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		A	Y	I	Y	A	V	M	Q	S	C	W	K	E	R	P	K	D	R	P	T	F	V	Y	L	.	.	T	E	F	F	A	R	D	P	D	Y	Q	N	L	P	E	L	V	Q	T
Query Conservation																										.	.
Alig confidence																										.	.
Template Conservation
Template Sequence		P	S	L	K	G	F	L	D	R	L	L	V	R	D	P	A	Q	R	A	T	A	A	E	L	L	K	H	P	F	L	A	K	A	G	P	P	A	S	I	V	P	L	M	R	Q
Template Known Secondary structure												S		S	S	T	T	T	S							T	T		G	G	G	G	G				G	G	G	T	G	G	G	S	G	G
Template Predicted Secondary structure
Template SS confidence
		543	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions