Job Description Q24145 Confidence 99.91% Date Tue Jan 22 11:35:34 GMT 2013 Rank 360 Aligned Residues 156 % Identity 26% Template c4b93B_ PDB info PDB header:exocytosis Chain: B: PDB Molecule:ankyrin repeat domain-containing protein 27; PDBTitle: complex of vamp7 cytoplasmic domain with 2nd ankyrin repeat2 domain of varp Resolution 2.00 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		R	S	H	G	V	T	N	L	L	H	R	A	T	S	K	N	E	S	K	V	V	F	E	L	L	K	C	G	.	Y	R	N	F	D	A	K	N	Q	D	G	Q	T	A	L	H	L	A	A	L	H	S	D	E	D	I	L	K	H	L	L	N	A	K	V	Q	V	N	S	S	D	S	F	G	C	Q	P	L	H	Y	A
Query Conservation																														.
Alig confidence																														.
Template Conservation
Template Sequence		K	D	Y	R	E	V	E	K	L	L	R	A	V	A	D	G	D	L	E	M	V	R	Y	L	L	E	W	T	S	G	L	G	V	N	V	T	S	Q	D	G	S	S	P	L	H	V	A	A	L	H	G	R	A	D	L	I	P	L	L	L	K	H	G	A	N	A	G	A	R	N	A	D	Q	A	V	P	L	H	L	A
Template Known Secondary structure																T	T										T							T	T				T	T	S										T	T		T	T								T	T			T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		665	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.																																	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	S	K	P	A	S	F	I	R	T	L	I	S	A	Q	A	N	V	Q	G	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	N	G	Y	V	P	L	H	E	A	A	K	H	G	N	L	E	A	V	Q	E	L	L	L
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	Q	Q	G	H	F	Q	V	V	K	C	L	L	D	S	N	A	K	P	N	K	K	D	L	S	G	N	T	P	L	I	Y	A	C	S	G	G	H	H	E	L	V	A	L	L	L	Q	H	G	A	S	I	N	A	S	N	N	K	G	N	T	A	L	H	E	A	V	I	E	K	H	V	F	V	V	E	L	L	L	L
Template Known Secondary structure					T											T	T			S					T	T											T	T		G	G	G							T	T			T	T		B		T	T	S		B								T	T
Template Predicted Secondary structure
Template SS confidence
		785	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	A	P	P	L	P	R	T	S	S	G	E	F	P	F	D	L	A	K	E	A	G	Q	T	A	V	E	E	F	L
Query Conservation
Alig confidence																									.	.
Template Conservation																									.	.
Template Sequence		H	G	A	S	V	Q	V	L	N	K	R	Q	R	T	A	V	D	C	A	E	Q	N	S	.	.	K	I	M	E	L	L
Template Known Secondary structure		T	T			S					T	T	S			S	G	G	G	S		T	T		.	.						T
Template Predicted Secondary structure																									.	.
Template SS confidence
		865	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.			.	.	890	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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